RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
CYFIP1-207ENST00000617556 MT1MQ8N339 61 aa3.96□□□□□ -1.78
CYFIP1-207ENST00000617556 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
CYFIP1-207ENST00000617556 MT4P47944 62 aa3.9□□□□□ -1.78
CYFIP1-207ENST00000617556 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
CYFIP1-207ENST00000617556 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
CYFIP1-207ENST00000617556 MUC2Q02817 5179 aa3.81□□□□□ -1.8
CYFIP1-207ENST00000617556 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
CYFIP1-207ENST00000617556 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CYFIP1-207ENST00000617556 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
CYFIP1-207ENST00000617556 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
CYFIP1-207ENST00000617556 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
CYFIP1-207ENST00000617556 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
CYFIP1-207ENST00000617556 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
CYFIP1-207ENST00000617556 MT3P25713 68 aa3.73□□□□□ -1.81
CYFIP1-207ENST00000617556 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
CYFIP1-207ENST00000617556 MT1AP04731 61 aa3.66□□□□□ -1.82
CYFIP1-207ENST00000617556 KRTAP6-3Q3LI67 103 aa3.65□□□□□ -1.82
CYFIP1-207ENST00000617556 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
CYFIP1-207ENST00000617556 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
CYFIP1-207ENST00000617556 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
CYFIP1-207ENST00000617556 KRTAP2-3P0C7H8 128 aa3.57□□□□□ -1.84
CYFIP1-207ENST00000617556 KRTAP2-4Q9BYR9 128 aa3.57□□□□□ -1.84
CYFIP1-207ENST00000617556 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
CYFIP1-207ENST00000617556 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
CYFIP1-207ENST00000617556 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CYFIP1-207ENST00000617556 USH2AO75445 5202 aa3.47□□□□□ -1.85
CYFIP1-207ENST00000617556 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
CYFIP1-207ENST00000617556 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
CYFIP1-207ENST00000617556 PRM1P04553 51 aa3.42□□□□□ -1.86
CYFIP1-207ENST00000617556 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
CYFIP1-207ENST00000617556 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CYFIP1-207ENST00000617556 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
CYFIP1-207ENST00000617556 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
CYFIP1-207ENST00000617556 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
CYFIP1-207ENST00000617556 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
CYFIP1-207ENST00000617556 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
CYFIP1-207ENST00000617556 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
CYFIP1-207ENST00000617556 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CYFIP1-207ENST00000617556 KMT2DO14686 5537 aa3.32□□□□□ -1.88
CYFIP1-207ENST00000617556 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
CYFIP1-207ENST00000617556 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CYFIP1-207ENST00000617556 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
CYFIP1-207ENST00000617556 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
CYFIP1-207ENST00000617556 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
CYFIP1-207ENST00000617556 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
CYFIP1-207ENST00000617556 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
CYFIP1-207ENST00000617556 NEBP20929 6669 aa3.05□□□□□ -1.92
CYFIP1-207ENST00000617556 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
CYFIP1-207ENST00000617556 KRTAP4-6Q9BYQ5 205 aa2.92□□□□□ -1.94
CYFIP1-207ENST00000617556 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
CYFIP1-207ENST00000617556 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
CYFIP1-207ENST00000617556 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
CYFIP1-207ENST00000617556 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
CYFIP1-207ENST00000617556 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CYFIP1-207ENST00000617556 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -2
CYFIP1-207ENST00000617556 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2.01
CYFIP1-207ENST00000617556 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2.01
CYFIP1-207ENST00000617556 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
CYFIP1-207ENST00000617556 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CYFIP1-207ENST00000617556 KRTAP5-3Q6L8H2 238 aa2.42□□□□□ -2.02
CYFIP1-207ENST00000617556 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
CYFIP1-207ENST00000617556 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
CYFIP1-207ENST00000617556 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
CYFIP1-207ENST00000617556 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CYFIP1-207ENST00000617556 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
CYFIP1-207ENST00000617556 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
CYFIP1-207ENST00000617556 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
CYFIP1-207ENST00000617556 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
CYFIP1-207ENST00000617556 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
CYFIP1-207ENST00000617556 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
CYFIP1-207ENST00000617556 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
CYFIP1-207ENST00000617556 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CYFIP1-207ENST00000617556 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
CYFIP1-207ENST00000617556 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
CYFIP1-207ENST00000617556 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
CYFIP1-207ENST00000617556 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 29.6 ms