RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
RFX3-212ENST00000617270 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
RFX3-212ENST00000617270 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
RFX3-212ENST00000617270 RYR2Q92736 4967 aa1.69□□□□□ -2.14
RFX3-212ENST00000617270 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
RFX3-212ENST00000617270 KRTAP9-2Q9BYQ4 174 aa1.67□□□□□ -2.14
RFX3-212ENST00000617270 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.14
RFX3-212ENST00000617270 KMT2CQ8NEZ4 4911 aaKnown RBP1.65□□□□□ -2.15
RFX3-212ENST00000617270 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
RFX3-212ENST00000617270 PKHD1P08F94 4074 aa1.64□□□□□ -2.15
RFX3-212ENST00000617270 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
RFX3-212ENST00000617270 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
RFX3-212ENST00000617270 LRP2P98164 4655 aa1.62□□□□□ -2.15
RFX3-212ENST00000617270 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
RFX3-212ENST00000617270 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
RFX3-212ENST00000617270 MUC2Q02817 5179 aa1.6□□□□□ -2.15
RFX3-212ENST00000617270 KRTAP19-7Q3SYF9 63 aa1.6□□□□□ -2.15
RFX3-212ENST00000617270 KRTAP19-2Q3LHN2 52 aa1.6□□□□□ -2.15
RFX3-212ENST00000617270 FSIP2Q5CZC0 6907 aa1.6□□□□□ -2.15
RFX3-212ENST00000617270 LCE4AQ5TA78 99 aa1.59□□□□□ -2.15
RFX3-212ENST00000617270 HSPG2P98160 4391 aa1.59□□□□□ -2.15
RFX3-212ENST00000617270 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
RFX3-212ENST00000617270 BIRC6Q9NR09 4857 aa1.59□□□□□ -2.16
RFX3-212ENST00000617270 KRTAP9-7A8MTY7 169 aa1.58□□□□□ -2.16
RFX3-212ENST00000617270 KRTAP9-6A0A140TA67 174 aa1.58□□□□□ -2.16
RFX3-212ENST00000617270 ABCA13Q86UQ4 5058 aa1.58□□□□□ -2.16
RFX3-212ENST00000617270 RNF213Q63HN8 5207 aa1.56□□□□□ -2.16
RFX3-212ENST00000617270 KRTAP9-4Q9BYQ2 154 aa1.54□□□□□ -2.16
RFX3-212ENST00000617270 KRTAP2-2Q9BYT5 123 aa1.53□□□□□ -2.16
RFX3-212ENST00000617270 LPAP08519 4548 aa1.53□□□□□ -2.16
RFX3-212ENST00000617270 MUC17Q685J3 4493 aa1.5□□□□□ -2.17
RFX3-212ENST00000617270 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
RFX3-212ENST00000617270 KRTAP6-3Q3LI67 103 aa1.46□□□□□ -2.18
RFX3-212ENST00000617270 LCE2AQ5TA79 106 aaPredicted RBP1.44□□□□□ -2.18
RFX3-212ENST00000617270 KRTAP9-9Q9BYP9 154 aa1.44□□□□□ -2.18
RFX3-212ENST00000617270 TNXBP22105 4242 aa1.44□□□□□ -2.18
RFX3-212ENST00000617270 FAT4Q6V0I7 4981 aa1.43□□□□□ -2.18
RFX3-212ENST00000617270 OBSCNQ5VST9 7968 aa1.43□□□□□ -2.18
RFX3-212ENST00000617270 USH2AO75445 5202 aa1.42□□□□□ -2.18
RFX3-212ENST00000617270 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.42□□□□□ -2.18
RFX3-212ENST00000617270 KRTAP4-11Q9BYQ6 195 aa1.41□□□□□ -2.18
RFX3-212ENST00000617270 HMCN2Q8NDA2 5059 aa1.38□□□□□ -2.19
RFX3-212ENST00000617270 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
RFX3-212ENST00000617270 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.19
RFX3-212ENST00000617270 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.2
RFX3-212ENST00000617270 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.2
RFX3-212ENST00000617270 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
RFX3-212ENST00000617270 NEBP20929 6669 aa1.32□□□□□ -2.2
RFX3-212ENST00000617270 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
RFX3-212ENST00000617270 KRTAP4-12Q9BQ66 201 aa1.29□□□□□ -2.2
RFX3-212ENST00000617270 KRTAP4-2Q9BYR5 136 aa1.29□□□□□ -2.2
RFX3-212ENST00000617270 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
RFX3-212ENST00000617270 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.2
RFX3-212ENST00000617270 KRTAP4-6Q9BYQ5 205 aa1.27□□□□□ -2.21
RFX3-212ENST00000617270 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
RFX3-212ENST00000617270 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
RFX3-212ENST00000617270 MDN1Q9NU22 5596 aa1.25□□□□□ -2.21
RFX3-212ENST00000617270 KMT2DO14686 5537 aa1.24□□□□□ -2.21
RFX3-212ENST00000617270 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
RFX3-212ENST00000617270 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
RFX3-212ENST00000617270 KRTAP5-9P26371 169 aa1.11□□□□□ -2.23
RFX3-212ENST00000617270 KRTAP5-5Q701N2 237 aaPredicted RBP1.1□□□□□ -2.23
RFX3-212ENST00000617270 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
RFX3-212ENST00000617270 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
RFX3-212ENST00000617270 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
RFX3-212ENST00000617270 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.05□□□□□ -2.24
RFX3-212ENST00000617270 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
RFX3-212ENST00000617270 PHGR1C9JFL3 82 aa0.96□□□□□ -2.26
RFX3-212ENST00000617270 KRTAP5-3Q6L8H2 238 aa0.95□□□□□ -2.26
RFX3-212ENST00000617270 KRTAP5-8O75690 187 aa0.89□□□□□ -2.27
RFX3-212ENST00000617270 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
RFX3-212ENST00000617270 KRTAP5-1Q6L8H4 278 aa0.79□□□□□ -2.28
RFX3-212ENST00000617270 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
RFX3-212ENST00000617270 KRTAP5-11Q6L8G4 156 aa0.73□□□□□ -2.29
RFX3-212ENST00000617270 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
RFX3-212ENST00000617270 KRTAP5-7Q6L8G8 165 aa0.59□□□□□ -2.32
RFX3-212ENST00000617270 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms