RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 LCE3EQ5T5B0 92 aa1.12□□□□□ -2.23
LPP-220ENST00000617246 LCE5AQ5TCM9 118 aa1.12□□□□□ -2.23
LPP-220ENST00000617246 ABCA13Q86UQ4 5058 aa1.12□□□□□ -2.23
LPP-220ENST00000617246 LCE1DQ5T752 114 aa1.12□□□□□ -2.23
LPP-220ENST00000617246 OBSCNQ5VST9 7968 aa1.12□□□□□ -2.23
LPP-220ENST00000617246 KRTAP9-8Q9BYQ0 159 aa1.12□□□□□ -2.23
LPP-220ENST00000617246 SYNE2Q8WXH0 6885 aaKnown RBP1.11□□□□□ -2.23
LPP-220ENST00000617246 EPPK1P58107 5090 aaKnown RBP1.11□□□□□ -2.23
LPP-220ENST00000617246 KIAA1109Q2LD37 5005 aa1.1□□□□□ -2.23
LPP-220ENST00000617246 MT1BP07438 61 aa1.1□□□□□ -2.23
LPP-220ENST00000617246 KRTAP9-4Q9BYQ2 154 aa1.1□□□□□ -2.23
LPP-220ENST00000617246 LCE3DQ9BYE3 92 aa1.1□□□□□ -2.23
LPP-220ENST00000617246 UBR4Q5T4S7 5183 aa1.09□□□□□ -2.23
LPP-220ENST00000617246 KRTAP9-3Q9BYQ3 159 aa1.08□□□□□ -2.24
LPP-220ENST00000617246 HMCN2Q8NDA2 5059 aa1.08□□□□□ -2.24
LPP-220ENST00000617246 MT1LQ93083 61 aa1.08□□□□□ -2.24
LPP-220ENST00000617246 MT1MQ8N339 61 aa1.07□□□□□ -2.24
LPP-220ENST00000617246 MT1XP80297 61 aa1.07□□□□□ -2.24
LPP-220ENST00000617246 LCE1BQ5T7P3 118 aa1.07□□□□□ -2.24
LPP-220ENST00000617246 NEBP20929 6669 aa1.06□□□□□ -2.24
LPP-220ENST00000617246 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
LPP-220ENST00000617246 LCE1EQ5T753 118 aa1.05□□□□□ -2.24
LPP-220ENST00000617246 LCE1FQ5T754 118 aa1.05□□□□□ -2.24
LPP-220ENST00000617246 FAT4Q6V0I7 4981 aa1.05□□□□□ -2.24
LPP-220ENST00000617246 FSIP2Q5CZC0 6907 aa1.05□□□□□ -2.24
LPP-220ENST00000617246 MT1EP04732 61 aa1.04□□□□□ -2.24
LPP-220ENST00000617246 RNF213Q63HN8 5207 aa1.03□□□□□ -2.24
LPP-220ENST00000617246 KMT2DO14686 5537 aa1.03□□□□□ -2.24
LPP-220ENST00000617246 KRTAP4-9Q9BYQ8 210 aa1.02□□□□□ -2.25
LPP-220ENST00000617246 MT1AP04731 61 aa1□□□□□ -2.25
LPP-220ENST00000617246 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
LPP-220ENST00000617246 KRTAP4-7Q9BYR0 210 aa0.99□□□□□ -2.25
LPP-220ENST00000617246 MDN1Q9NU22 5596 aa0.99□□□□□ -2.25
LPP-220ENST00000617246 KRTAP4-8A0A0G2JLE6 195 aa0.99□□□□□ -2.25
LPP-220ENST00000617246 KRTAP4-8Q9BYQ9 185 aa0.99□□□□□ -2.25
LPP-220ENST00000617246 SSPOA2VEC9 5147 aa0.97□□□□□ -2.25
LPP-220ENST00000617246 KRTAP5-9P26371 169 aa0.96□□□□□ -2.26
LPP-220ENST00000617246 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
LPP-220ENST00000617246 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
LPP-220ENST00000617246 LOC100996750A0A140TA64 210 aa0.94□□□□□ -2.26
LPP-220ENST00000617246 MUC2Q02817 5179 aa0.94□□□□□ -2.26
LPP-220ENST00000617246 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
LPP-220ENST00000617246 KRTAP5-4Q6L8H1 288 aa0.9□□□□□ -2.27
LPP-220ENST00000617246 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.27
LPP-220ENST00000617246 PRM1P04553 51 aa0.89□□□□□ -2.27
LPP-220ENST00000617246 KRTAP19-2Q3LHN2 52 aa0.87□□□□□ -2.27
LPP-220ENST00000617246 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
LPP-220ENST00000617246 FCGBPQ9Y6R7 5405 aaPredicted RBP0.86□□□□□ -2.27
LPP-220ENST00000617246 KRTAP4-2Q9BYR5 136 aa0.86□□□□□ -2.27
LPP-220ENST00000617246 KRTAP6-2Q3LI66 62 aa0.86□□□□□ -2.27
LPP-220ENST00000617246 KRTAP4-3Q9BYR4 195 aa0.86□□□□□ -2.27
LPP-220ENST00000617246 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
LPP-220ENST00000617246 KRTAP9-6A8MVA2 160 aa0.85□□□□□ -2.27
LPP-220ENST00000617246 KRTAP19-7Q3SYF9 63 aa0.85□□□□□ -2.27
LPP-220ENST00000617246 USH2AO75445 5202 aa0.84□□□□□ -2.27
LPP-220ENST00000617246 HMCN1Q96RW7 5635 aa0.84□□□□□ -2.27
LPP-220ENST00000617246 KRTAP5-3Q6L8H2 238 aa0.82□□□□□ -2.28
LPP-220ENST00000617246 KRTAP6-1Q3LI64 71 aa0.8□□□□□ -2.28
LPP-220ENST00000617246 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
LPP-220ENST00000617246 KRTAP4-12Q9BQ66 201 aa0.78□□□□□ -2.28
LPP-220ENST00000617246 KRTAP5-5Q701N2 237 aaPredicted RBP0.77□□□□□ -2.29
LPP-220ENST00000617246 KRTAP4-11Q9BYQ6 195 aa0.77□□□□□ -2.29
LPP-220ENST00000617246 MUC19Q7Z5P9 8384 aa0.76□□□□□ -2.29
LPP-220ENST00000617246 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
LPP-220ENST00000617246 KRTAP4-6Q9BYQ5 205 aa0.74□□□□□ -2.29
LPP-220ENST00000617246 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
LPP-220ENST00000617246 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
LPP-220ENST00000617246 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
LPP-220ENST00000617246 KRTAP5-8O75690 187 aa0.65□□□□□ -2.3
LPP-220ENST00000617246 KRTAP4-4Q9BYR3 166 aa0.62□□□□□ -2.31
LPP-220ENST00000617246 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
LPP-220ENST00000617246 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
LPP-220ENST00000617246 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
LPP-220ENST00000617246 KRTAP5-11Q6L8G4 156 aa0.56□□□□□ -2.32
LPP-220ENST00000617246 KRTAP5-2Q701N4 177 aa0.56□□□□□ -2.32
LPP-220ENST00000617246 KRTAP5-1Q6L8H4 278 aa0.55□□□□□ -2.32
LPP-220ENST00000617246 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms