RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 RNF213Q63HN8 5207 aa5.96□□□□□ -1.46
CDH23-212ENST00000616684 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
CDH23-212ENST00000616684 MT1MQ8N339 61 aa5.89□□□□□ -1.47
CDH23-212ENST00000616684 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
CDH23-212ENST00000616684 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
CDH23-212ENST00000616684 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
CDH23-212ENST00000616684 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
CDH23-212ENST00000616684 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
CDH23-212ENST00000616684 MUC2Q02817 5179 aa5.74□□□□□ -1.49
CDH23-212ENST00000616684 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
CDH23-212ENST00000616684 MT3P25713 68 aa5.65□□□□□ -1.51
CDH23-212ENST00000616684 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
CDH23-212ENST00000616684 MT4P47944 62 aa5.52□□□□□ -1.53
CDH23-212ENST00000616684 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
CDH23-212ENST00000616684 PRM1P04553 51 aa5.49□□□□□ -1.53
CDH23-212ENST00000616684 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
CDH23-212ENST00000616684 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
CDH23-212ENST00000616684 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
CDH23-212ENST00000616684 MT1AP04731 61 aa5.45□□□□□ -1.54
CDH23-212ENST00000616684 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
CDH23-212ENST00000616684 KRTAP9-6A8MVA2 160 aa5.35□□□□□ -1.55
CDH23-212ENST00000616684 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
CDH23-212ENST00000616684 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
CDH23-212ENST00000616684 LCE1BQ5T7P3 118 aa5.3□□□□□ -1.56
CDH23-212ENST00000616684 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
CDH23-212ENST00000616684 USH2AO75445 5202 aa5.22□□□□□ -1.57
CDH23-212ENST00000616684 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
CDH23-212ENST00000616684 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
CDH23-212ENST00000616684 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
CDH23-212ENST00000616684 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
CDH23-212ENST00000616684 DSTQ03001 7570 aaKnown RBP5.15□□□□□ -1.59
CDH23-212ENST00000616684 KRTAP6-3Q3LI67 103 aa5.04□□□□□ -1.6
CDH23-212ENST00000616684 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
CDH23-212ENST00000616684 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
CDH23-212ENST00000616684 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
CDH23-212ENST00000616684 KMT2DO14686 5537 aa4.92□□□□□ -1.62
CDH23-212ENST00000616684 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
CDH23-212ENST00000616684 KRTAP20-1Q3LI63 56 aa4.91□□□□□ -1.62
CDH23-212ENST00000616684 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
CDH23-212ENST00000616684 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
CDH23-212ENST00000616684 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
CDH23-212ENST00000616684 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
CDH23-212ENST00000616684 SSPOA2VEC9 5147 aa4.61□□□□□ -1.67
CDH23-212ENST00000616684 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
CDH23-212ENST00000616684 MUC19Q7Z5P9 8384 aa4.48□□□□□ -1.69
CDH23-212ENST00000616684 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
CDH23-212ENST00000616684 NEBP20929 6669 aa4.38□□□□□ -1.71
CDH23-212ENST00000616684 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
CDH23-212ENST00000616684 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
CDH23-212ENST00000616684 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
CDH23-212ENST00000616684 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
CDH23-212ENST00000616684 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
CDH23-212ENST00000616684 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
CDH23-212ENST00000616684 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
CDH23-212ENST00000616684 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
CDH23-212ENST00000616684 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
CDH23-212ENST00000616684 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
CDH23-212ENST00000616684 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
CDH23-212ENST00000616684 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
CDH23-212ENST00000616684 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
CDH23-212ENST00000616684 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
CDH23-212ENST00000616684 HMCN1Q96RW7 5635 aa3.64□□□□□ -1.83
CDH23-212ENST00000616684 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CDH23-212ENST00000616684 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
CDH23-212ENST00000616684 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
CDH23-212ENST00000616684 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
CDH23-212ENST00000616684 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
CDH23-212ENST00000616684 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
CDH23-212ENST00000616684 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
CDH23-212ENST00000616684 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
CDH23-212ENST00000616684 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
CDH23-212ENST00000616684 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.97
CDH23-212ENST00000616684 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CDH23-212ENST00000616684 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
CDH23-212ENST00000616684 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
CDH23-212ENST00000616684 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
CDH23-212ENST00000616684 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms