RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 KRTAP4-7Q9BYR0 210 aa2.85□□□□□ -1.95
SPTBN1-207ENST00000615901 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
SPTBN1-207ENST00000615901 KRTAP9-2Q9BYQ4 174 aa2.82□□□□□ -1.96
SPTBN1-207ENST00000615901 KRTAP19-7Q3SYF9 63 aa2.77□□□□□ -1.97
SPTBN1-207ENST00000615901 MT1AP04731 61 aa2.73□□□□□ -1.97
SPTBN1-207ENST00000615901 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
SPTBN1-207ENST00000615901 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
SPTBN1-207ENST00000615901 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
SPTBN1-207ENST00000615901 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
SPTBN1-207ENST00000615901 MT4P47944 62 aa2.69□□□□□ -1.98
SPTBN1-207ENST00000615901 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
SPTBN1-207ENST00000615901 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
SPTBN1-207ENST00000615901 KRTAP9-6A0A140TA67 174 aa2.66□□□□□ -1.98
SPTBN1-207ENST00000615901 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.98
SPTBN1-207ENST00000615901 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.98
SPTBN1-207ENST00000615901 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.99
SPTBN1-207ENST00000615901 PRM1P04553 51 aa2.63□□□□□ -1.99
SPTBN1-207ENST00000615901 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
SPTBN1-207ENST00000615901 LCE5AQ5TCM9 118 aa2.59□□□□□ -2
SPTBN1-207ENST00000615901 LCE1DQ5T752 114 aa2.56□□□□□ -2
SPTBN1-207ENST00000615901 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SPTBN1-207ENST00000615901 SYNE1Q8NF91 8797 aaKnown RBP2.54□□□□□ -2
SPTBN1-207ENST00000615901 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SPTBN1-207ENST00000615901 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
SPTBN1-207ENST00000615901 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
SPTBN1-207ENST00000615901 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
SPTBN1-207ENST00000615901 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
SPTBN1-207ENST00000615901 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
SPTBN1-207ENST00000615901 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
SPTBN1-207ENST00000615901 KRTAP4-9Q9BYQ8 210 aa2.46□□□□□ -2.02
SPTBN1-207ENST00000615901 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
SPTBN1-207ENST00000615901 MUC2Q02817 5179 aa2.44□□□□□ -2.02
SPTBN1-207ENST00000615901 USH2AO75445 5202 aa2.42□□□□□ -2.02
SPTBN1-207ENST00000615901 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
SPTBN1-207ENST00000615901 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.04
SPTBN1-207ENST00000615901 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
SPTBN1-207ENST00000615901 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
SPTBN1-207ENST00000615901 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
SPTBN1-207ENST00000615901 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SPTBN1-207ENST00000615901 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
SPTBN1-207ENST00000615901 SSPOA2VEC9 5147 aa2.25□□□□□ -2.05
SPTBN1-207ENST00000615901 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
SPTBN1-207ENST00000615901 NEBP20929 6669 aa2.17□□□□□ -2.06
SPTBN1-207ENST00000615901 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
SPTBN1-207ENST00000615901 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.08
SPTBN1-207ENST00000615901 KMT2DO14686 5537 aa2.05□□□□□ -2.08
SPTBN1-207ENST00000615901 KRTAP4-6Q9BYQ5 205 aa2.04□□□□□ -2.08
SPTBN1-207ENST00000615901 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
SPTBN1-207ENST00000615901 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
SPTBN1-207ENST00000615901 KRTAP5-5Q701N2 237 aaPredicted RBP1.96□□□□□ -2.1
SPTBN1-207ENST00000615901 MUC12Q9UKN1 5478 aa1.9□□□□□ -2.1
SPTBN1-207ENST00000615901 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
SPTBN1-207ENST00000615901 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
SPTBN1-207ENST00000615901 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
SPTBN1-207ENST00000615901 KRTAP5-3Q6L8H2 238 aa1.77□□□□□ -2.13
SPTBN1-207ENST00000615901 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
SPTBN1-207ENST00000615901 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
SPTBN1-207ENST00000615901 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
SPTBN1-207ENST00000615901 KRTAP4-12Q9BQ66 201 aa1.7□□□□□ -2.14
SPTBN1-207ENST00000615901 KRTAP4-2Q9BYR5 136 aa1.7□□□□□ -2.14
SPTBN1-207ENST00000615901 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
SPTBN1-207ENST00000615901 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
SPTBN1-207ENST00000615901 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
SPTBN1-207ENST00000615901 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
SPTBN1-207ENST00000615901 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
SPTBN1-207ENST00000615901 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
SPTBN1-207ENST00000615901 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
SPTBN1-207ENST00000615901 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
SPTBN1-207ENST00000615901 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
SPTBN1-207ENST00000615901 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
SPTBN1-207ENST00000615901 KRTAP5-1Q6L8H4 278 aa1.37□□□□□ -2.19
SPTBN1-207ENST00000615901 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.2
SPTBN1-207ENST00000615901 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.2
SPTBN1-207ENST00000615901 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
SPTBN1-207ENST00000615901 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SPTBN1-207ENST00000615901 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
SPTBN1-207ENST00000615901 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms