RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 KMT2CQ8NEZ4 4911 aaKnown RBP4.03□□□□□ -1.76
NLRC3-204ENST00000615877 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
NLRC3-204ENST00000615877 MUC17Q685J3 4493 aa4□□□□□ -1.77
NLRC3-204ENST00000615877 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
NLRC3-204ENST00000615877 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
NLRC3-204ENST00000615877 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
NLRC3-204ENST00000615877 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
NLRC3-204ENST00000615877 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
NLRC3-204ENST00000615877 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
NLRC3-204ENST00000615877 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
NLRC3-204ENST00000615877 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
NLRC3-204ENST00000615877 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
NLRC3-204ENST00000615877 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
NLRC3-204ENST00000615877 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
NLRC3-204ENST00000615877 MT1AP04731 61 aa3.81□□□□□ -1.8
NLRC3-204ENST00000615877 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
NLRC3-204ENST00000615877 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
NLRC3-204ENST00000615877 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
NLRC3-204ENST00000615877 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
NLRC3-204ENST00000615877 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
NLRC3-204ENST00000615877 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
NLRC3-204ENST00000615877 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
NLRC3-204ENST00000615877 ABCA13Q86UQ4 5058 aa3.72□□□□□ -1.81
NLRC3-204ENST00000615877 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
NLRC3-204ENST00000615877 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
NLRC3-204ENST00000615877 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
NLRC3-204ENST00000615877 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.84
NLRC3-204ENST00000615877 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
NLRC3-204ENST00000615877 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.85
NLRC3-204ENST00000615877 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
NLRC3-204ENST00000615877 FAT4Q6V0I7 4981 aa3.52□□□□□ -1.85
NLRC3-204ENST00000615877 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
NLRC3-204ENST00000615877 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
NLRC3-204ENST00000615877 RNF213Q63HN8 5207 aa3.48□□□□□ -1.85
NLRC3-204ENST00000615877 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
NLRC3-204ENST00000615877 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.86
NLRC3-204ENST00000615877 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
NLRC3-204ENST00000615877 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
NLRC3-204ENST00000615877 MUC2Q02817 5179 aa3.35□□□□□ -1.87
NLRC3-204ENST00000615877 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
NLRC3-204ENST00000615877 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
NLRC3-204ENST00000615877 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.92
NLRC3-204ENST00000615877 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
NLRC3-204ENST00000615877 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
NLRC3-204ENST00000615877 KRTAP4-4Q9BYR3 166 aa3.01□□□□□ -1.93
NLRC3-204ENST00000615877 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
NLRC3-204ENST00000615877 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
NLRC3-204ENST00000615877 KMT2DO14686 5537 aa2.98□□□□□ -1.93
NLRC3-204ENST00000615877 USH2AO75445 5202 aa2.95□□□□□ -1.94
NLRC3-204ENST00000615877 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
NLRC3-204ENST00000615877 MACF1Q9UPN3 7388 aaKnown RBP2.81□□□□□ -1.96
NLRC3-204ENST00000615877 NEBP20929 6669 aa2.8□□□□□ -1.96
NLRC3-204ENST00000615877 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
NLRC3-204ENST00000615877 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
NLRC3-204ENST00000615877 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
NLRC3-204ENST00000615877 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
NLRC3-204ENST00000615877 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
NLRC3-204ENST00000615877 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
NLRC3-204ENST00000615877 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
NLRC3-204ENST00000615877 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
NLRC3-204ENST00000615877 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
NLRC3-204ENST00000615877 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
NLRC3-204ENST00000615877 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
NLRC3-204ENST00000615877 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
NLRC3-204ENST00000615877 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
NLRC3-204ENST00000615877 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
NLRC3-204ENST00000615877 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
NLRC3-204ENST00000615877 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
NLRC3-204ENST00000615877 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
NLRC3-204ENST00000615877 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
NLRC3-204ENST00000615877 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
NLRC3-204ENST00000615877 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
NLRC3-204ENST00000615877 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
NLRC3-204ENST00000615877 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
NLRC3-204ENST00000615877 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
NLRC3-204ENST00000615877 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
NLRC3-204ENST00000615877 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.18
NLRC3-204ENST00000615877 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 72.4 ms