RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
NLRC3-204ENST00000615877 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
NLRC3-204ENST00000615877 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
NLRC3-204ENST00000615877 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
NLRC3-204ENST00000615877 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
NLRC3-204ENST00000615877 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
NLRC3-204ENST00000615877 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.93
NLRC3-204ENST00000615877 APLP2Q06481 763 aa20.83■□□□□ 0.92
NLRC3-204ENST00000615877 RANGAP1P46060 587 aaPredicted RBP20.68■□□□□ 0.9
NLRC3-204ENST00000615877 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
NLRC3-204ENST00000615877 PCGF6Q9BYE7 350 aa20.61■□□□□ 0.89
NLRC3-204ENST00000615877 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
NLRC3-204ENST00000615877 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
NLRC3-204ENST00000615877 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
NLRC3-204ENST00000615877 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
NLRC3-204ENST00000615877 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
NLRC3-204ENST00000615877 MYT1Q01538 1121 aa20.3■□□□□ 0.84
NLRC3-204ENST00000615877 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
NLRC3-204ENST00000615877 NEFLP07196 543 aa19.97■□□□□ 0.79
NLRC3-204ENST00000615877 TRIM41Q8WV44 630 aa19.93■□□□□ 0.78
NLRC3-204ENST00000615877 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
NLRC3-204ENST00000615877 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
NLRC3-204ENST00000615877 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
NLRC3-204ENST00000615877 PPARGC1BQ86YN6 1023 aaKnown RBP19.76■□□□□ 0.75
NLRC3-204ENST00000615877 POLR3GLQ9BT43 218 aa19.74■□□□□ 0.75
NLRC3-204ENST00000615877 HRCP23327 699 aa19.68■□□□□ 0.74
NLRC3-204ENST00000615877 CNGB1Q14028 1251 aaPredicted RBP19.66■□□□□ 0.74
NLRC3-204ENST00000615877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
NLRC3-204ENST00000615877 HNRNPUL2Q1KMD3 747 aaKnown RBP19.66■□□□□ 0.74
NLRC3-204ENST00000615877 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
NLRC3-204ENST00000615877 ITGAEP38570 1179 aa19.56■□□□□ 0.72
NLRC3-204ENST00000615877 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
NLRC3-204ENST00000615877 DAXXQ9UER7 740 aaPredicted RBP19.43■□□□□ 0.7
NLRC3-204ENST00000615877 LOC105371045A0A1W2PR82 267 aa19.2■□□□□ 0.66
NLRC3-204ENST00000615877 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
NLRC3-204ENST00000615877 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
NLRC3-204ENST00000615877 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
NLRC3-204ENST00000615877 ZNF316A6NFI3 1004 aaPredicted RBP19.01■□□□□ 0.63
NLRC3-204ENST00000615877 SLC24A1O60721 1099 aa18.99■□□□□ 0.63
NLRC3-204ENST00000615877 BCL11AQ9H165 835 aa18.98■□□□□ 0.63
NLRC3-204ENST00000615877 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
NLRC3-204ENST00000615877 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
NLRC3-204ENST00000615877 TRIM52Q96A61 297 aa18.86■□□□□ 0.61
NLRC3-204ENST00000615877 BCANQ96GW7 911 aa18.85■□□□□ 0.61
NLRC3-204ENST00000615877 ZNF326Q5BKZ1 582 aaKnown RBP18.79■□□□□ 0.6
NLRC3-204ENST00000615877 FBLN2P98095 1184 aa18.77■□□□□ 0.6
NLRC3-204ENST00000615877 NEUROD1Q13562 356 aa18.77■□□□□ 0.59
NLRC3-204ENST00000615877 CDK11AQ9UQ88 783 aaPredicted RBP18.74■□□□□ 0.59
NLRC3-204ENST00000615877 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
NLRC3-204ENST00000615877 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
NLRC3-204ENST00000615877 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.58
NLRC3-204ENST00000615877 ANP32CO43423 234 aa18.64■□□□□ 0.57
NLRC3-204ENST00000615877 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
NLRC3-204ENST00000615877 ARID3CA6NKF2 412 aa18.62■□□□□ 0.57
NLRC3-204ENST00000615877 CANXP27824 592 aaKnown RBP18.55■□□□□ 0.56
NLRC3-204ENST00000615877 ANP32AP39687 249 aaKnown RBP18.44■□□□□ 0.54
NLRC3-204ENST00000615877 NEFMP07197 916 aa18.41■□□□□ 0.54
NLRC3-204ENST00000615877 P3H3Q8IVL6 736 aa18.39■□□□□ 0.54
NLRC3-204ENST00000615877 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
NLRC3-204ENST00000615877 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.53
NLRC3-204ENST00000615877 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
NLRC3-204ENST00000615877 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
NLRC3-204ENST00000615877 ABCC9O60706 1549 aa18.29■□□□□ 0.52
NLRC3-204ENST00000615877 EIF5BO60841 1220 aaKnown RBP18.28■□□□□ 0.52
NLRC3-204ENST00000615877 STAG3Q9UJ98 1225 aa18.28■□□□□ 0.52
NLRC3-204ENST00000615877 FKBP8Q14318 412 aa18.28■□□□□ 0.52
NLRC3-204ENST00000615877 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
NLRC3-204ENST00000615877 A0A0G2JS52 829 aa18.24■□□□□ 0.51
NLRC3-204ENST00000615877 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
NLRC3-204ENST00000615877 SENP3Q9H4L4 574 aaPredicted RBP18.17■□□□□ 0.5
NLRC3-204ENST00000615877 ANP32BQ92688 251 aaKnown RBP18.12■□□□□ 0.49
NLRC3-204ENST00000615877 ZBTB7CA1YPR0 619 aa18.09■□□□□ 0.49
NLRC3-204ENST00000615877 GLIPR1L2Q4G1C9 344 aa18.09■□□□□ 0.49
NLRC3-204ENST00000615877 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
NLRC3-204ENST00000615877 HNRNPUQ00839 825 aaKnown RBP eCLIP18.07■□□□□ 0.48
NLRC3-204ENST00000615877 NBR1Q14596 966 aa18.06■□□□□ 0.48
NLRC3-204ENST00000615877 HSP90AA1P07900 732 aaKnown RBP18.05■□□□□ 0.48
NLRC3-204ENST00000615877 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
NLRC3-204ENST00000615877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.47
NLRC3-204ENST00000615877 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
NLRC3-204ENST00000615877 UPF2Q9HAU5 1272 aaKnown RBP18■□□□□ 0.47
NLRC3-204ENST00000615877 DDX10Q13206 875 aaKnown RBP17.99■□□□□ 0.47
NLRC3-204ENST00000615877 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
NLRC3-204ENST00000615877 TONSLQ96HA7 1378 aa17.98■□□□□ 0.47
NLRC3-204ENST00000615877 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
NLRC3-204ENST00000615877 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
NLRC3-204ENST00000615877 ARXQ96QS3 562 aa17.93■□□□□ 0.46
NLRC3-204ENST00000615877 C14orf37Q86TY3 774 aa17.92■□□□□ 0.46
NLRC3-204ENST00000615877 MIER1Q8N108 512 aa17.86■□□□□ 0.45
NLRC3-204ENST00000615877 CHIC2Q9UKJ5 165 aa17.84■□□□□ 0.45
NLRC3-204ENST00000615877 TULP1O00294 542 aaPredicted RBP17.84■□□□□ 0.45
NLRC3-204ENST00000615877 KDM2AQ9Y2K7 1162 aa17.82■□□□□ 0.44
NLRC3-204ENST00000615877 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
NLRC3-204ENST00000615877 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.8■□□□□ 0.44
NLRC3-204ENST00000615877 TMC1Q8TDI8 760 aa17.79■□□□□ 0.44
NLRC3-204ENST00000615877 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
NLRC3-204ENST00000615877 CDK11BP21127 795 aaKnown RBP17.76■□□□□ 0.43
NLRC3-204ENST00000615877 ANP32EQ9BTT0 268 aa17.75■□□□□ 0.43
NLRC3-204ENST00000615877 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
NLRC3-204ENST00000615877 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 404.2 ms