RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 KRTAP19-2Q3LHN2 52 aa2.99□□□□□ -1.93
SHTN1-207ENST00000615301 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SHTN1-207ENST00000615301 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
SHTN1-207ENST00000615301 MUC17Q685J3 4493 aa2.98□□□□□ -1.93
SHTN1-207ENST00000615301 MT3P25713 68 aa2.97□□□□□ -1.93
SHTN1-207ENST00000615301 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
SHTN1-207ENST00000615301 MUC2Q02817 5179 aa2.91□□□□□ -1.94
SHTN1-207ENST00000615301 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
SHTN1-207ENST00000615301 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
SHTN1-207ENST00000615301 SYNE2Q8WXH0 6885 aaKnown RBP2.88□□□□□ -1.95
SHTN1-207ENST00000615301 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
SHTN1-207ENST00000615301 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
SHTN1-207ENST00000615301 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
SHTN1-207ENST00000615301 RNF213Q63HN8 5207 aa2.83□□□□□ -1.96
SHTN1-207ENST00000615301 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
SHTN1-207ENST00000615301 TNXBP22105 4242 aa2.81□□□□□ -1.96
SHTN1-207ENST00000615301 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
SHTN1-207ENST00000615301 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
SHTN1-207ENST00000615301 KRTAP2-1Q9BYU5 128 aa2.8□□□□□ -1.96
SHTN1-207ENST00000615301 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
SHTN1-207ENST00000615301 MT1AP04731 61 aa2.78□□□□□ -1.96
SHTN1-207ENST00000615301 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
SHTN1-207ENST00000615301 LCE5AQ5TCM9 118 aa2.74□□□□□ -1.97
SHTN1-207ENST00000615301 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
SHTN1-207ENST00000615301 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
SHTN1-207ENST00000615301 KRTAP9-2Q9BYQ4 174 aa2.71□□□□□ -1.98
SHTN1-207ENST00000615301 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
SHTN1-207ENST00000615301 KRTAP9-7A8MTY7 169 aa2.68□□□□□ -1.98
SHTN1-207ENST00000615301 LCE2AQ5TA79 106 aaPredicted RBP2.67□□□□□ -1.98
SHTN1-207ENST00000615301 USH2AO75445 5202 aa2.63□□□□□ -1.99
SHTN1-207ENST00000615301 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
SHTN1-207ENST00000615301 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
SHTN1-207ENST00000615301 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
SHTN1-207ENST00000615301 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
SHTN1-207ENST00000615301 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
SHTN1-207ENST00000615301 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SHTN1-207ENST00000615301 LCE1AQ5T7P2 110 aa2.51□□□□□ -2.01
SHTN1-207ENST00000615301 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SHTN1-207ENST00000615301 KRTAP9-6A0A140TA67 174 aa2.48□□□□□ -2.01
SHTN1-207ENST00000615301 KMT2DO14686 5537 aa2.46□□□□□ -2.02
SHTN1-207ENST00000615301 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
SHTN1-207ENST00000615301 KRTAP2-2Q9BYT5 123 aa2.46□□□□□ -2.02
SHTN1-207ENST00000615301 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
SHTN1-207ENST00000615301 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
SHTN1-207ENST00000615301 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.04
SHTN1-207ENST00000615301 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
SHTN1-207ENST00000615301 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.32□□□□□ -2.04
SHTN1-207ENST00000615301 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
SHTN1-207ENST00000615301 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
SHTN1-207ENST00000615301 NEBP20929 6669 aa2.16□□□□□ -2.06
SHTN1-207ENST00000615301 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
SHTN1-207ENST00000615301 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SHTN1-207ENST00000615301 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
SHTN1-207ENST00000615301 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
SHTN1-207ENST00000615301 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
SHTN1-207ENST00000615301 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
SHTN1-207ENST00000615301 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
SHTN1-207ENST00000615301 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
SHTN1-207ENST00000615301 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
SHTN1-207ENST00000615301 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.1
SHTN1-207ENST00000615301 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
SHTN1-207ENST00000615301 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
SHTN1-207ENST00000615301 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
SHTN1-207ENST00000615301 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
SHTN1-207ENST00000615301 KRTAP5-3Q6L8H2 238 aa1.58□□□□□ -2.16
SHTN1-207ENST00000615301 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
SHTN1-207ENST00000615301 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
SHTN1-207ENST00000615301 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
SHTN1-207ENST00000615301 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
SHTN1-207ENST00000615301 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
SHTN1-207ENST00000615301 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
SHTN1-207ENST00000615301 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
SHTN1-207ENST00000615301 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
SHTN1-207ENST00000615301 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SHTN1-207ENST00000615301 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
SHTN1-207ENST00000615301 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
SHTN1-207ENST00000615301 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms