RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
TNFRSF9-204ENST00000615230 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
TNFRSF9-204ENST00000615230 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
TNFRSF9-204ENST00000615230 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
TNFRSF9-204ENST00000615230 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
TNFRSF9-204ENST00000615230 MT4P47944 62 aa3.07□□□□□ -1.92
TNFRSF9-204ENST00000615230 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
TNFRSF9-204ENST00000615230 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
TNFRSF9-204ENST00000615230 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
TNFRSF9-204ENST00000615230 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
TNFRSF9-204ENST00000615230 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
TNFRSF9-204ENST00000615230 MT1AP04731 61 aa2.99□□□□□ -1.93
TNFRSF9-204ENST00000615230 LPAP08519 4548 aa2.99□□□□□ -1.93
TNFRSF9-204ENST00000615230 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.94
TNFRSF9-204ENST00000615230 EPPK1P58107 5090 aaKnown RBP2.89□□□□□ -1.95
TNFRSF9-204ENST00000615230 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
TNFRSF9-204ENST00000615230 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
TNFRSF9-204ENST00000615230 LCE5AQ5TCM9 118 aa2.82□□□□□ -1.96
TNFRSF9-204ENST00000615230 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
TNFRSF9-204ENST00000615230 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
TNFRSF9-204ENST00000615230 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
TNFRSF9-204ENST00000615230 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
TNFRSF9-204ENST00000615230 LOC100996750A0A140TA64 210 aa2.78□□□□□ -1.97
TNFRSF9-204ENST00000615230 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
TNFRSF9-204ENST00000615230 HMCN2Q8NDA2 5059 aa2.77□□□□□ -1.97
TNFRSF9-204ENST00000615230 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
TNFRSF9-204ENST00000615230 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.98
TNFRSF9-204ENST00000615230 UBR4Q5T4S7 5183 aa2.65□□□□□ -1.99
TNFRSF9-204ENST00000615230 PRM1P04553 51 aa2.63□□□□□ -1.99
TNFRSF9-204ENST00000615230 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
TNFRSF9-204ENST00000615230 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
TNFRSF9-204ENST00000615230 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
TNFRSF9-204ENST00000615230 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
TNFRSF9-204ENST00000615230 NEBP20929 6669 aa2.53□□□□□ -2
TNFRSF9-204ENST00000615230 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
TNFRSF9-204ENST00000615230 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
TNFRSF9-204ENST00000615230 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TNFRSF9-204ENST00000615230 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
TNFRSF9-204ENST00000615230 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
TNFRSF9-204ENST00000615230 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
TNFRSF9-204ENST00000615230 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
TNFRSF9-204ENST00000615230 MUC2Q02817 5179 aa2.39□□□□□ -2.03
TNFRSF9-204ENST00000615230 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
TNFRSF9-204ENST00000615230 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
TNFRSF9-204ENST00000615230 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
TNFRSF9-204ENST00000615230 USH2AO75445 5202 aa2.25□□□□□ -2.05
TNFRSF9-204ENST00000615230 MACF1Q9UPN3 7388 aaKnown RBP2.17□□□□□ -2.06
TNFRSF9-204ENST00000615230 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
TNFRSF9-204ENST00000615230 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
TNFRSF9-204ENST00000615230 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
TNFRSF9-204ENST00000615230 KRTAP5-3Q6L8H2 238 aa2.08□□□□□ -2.08
TNFRSF9-204ENST00000615230 FCGBPQ9Y6R7 5405 aaPredicted RBP2.05□□□□□ -2.08
TNFRSF9-204ENST00000615230 KMT2DO14686 5537 aa2.03□□□□□ -2.08
TNFRSF9-204ENST00000615230 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
TNFRSF9-204ENST00000615230 KRTAP4-12Q9BQ66 201 aa1.99□□□□□ -2.09
TNFRSF9-204ENST00000615230 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
TNFRSF9-204ENST00000615230 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
TNFRSF9-204ENST00000615230 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
TNFRSF9-204ENST00000615230 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
TNFRSF9-204ENST00000615230 MUC5ACP98088 5654 aa1.85□□□□□ -2.11
TNFRSF9-204ENST00000615230 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
TNFRSF9-204ENST00000615230 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
TNFRSF9-204ENST00000615230 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
TNFRSF9-204ENST00000615230 KRTAP5-8O75690 187 aa1.78□□□□□ -2.13
TNFRSF9-204ENST00000615230 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
TNFRSF9-204ENST00000615230 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
TNFRSF9-204ENST00000615230 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
TNFRSF9-204ENST00000615230 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
TNFRSF9-204ENST00000615230 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
TNFRSF9-204ENST00000615230 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
TNFRSF9-204ENST00000615230 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
TNFRSF9-204ENST00000615230 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
TNFRSF9-204ENST00000615230 KRTAP5-1Q6L8H4 278 aa1.52□□□□□ -2.17
TNFRSF9-204ENST00000615230 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
TNFRSF9-204ENST00000615230 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
TNFRSF9-204ENST00000615230 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
TNFRSF9-204ENST00000615230 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 36.4 ms