RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
SLC6A6-204ENST00000613060 PRM1P04553 51 aa3.77□□□□□ -1.81
SLC6A6-204ENST00000613060 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
SLC6A6-204ENST00000613060 MT1EP04732 61 aa3.7□□□□□ -1.82
SLC6A6-204ENST00000613060 RYR3Q15413 4870 aa3.69□□□□□ -1.82
SLC6A6-204ENST00000613060 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
SLC6A6-204ENST00000613060 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
SLC6A6-204ENST00000613060 MT1MQ8N339 61 aa3.65□□□□□ -1.82
SLC6A6-204ENST00000613060 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
SLC6A6-204ENST00000613060 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SLC6A6-204ENST00000613060 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SLC6A6-204ENST00000613060 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
SLC6A6-204ENST00000613060 RYR2Q92736 4967 aa3.61□□□□□ -1.83
SLC6A6-204ENST00000613060 HERC2O95714 4834 aa3.59□□□□□ -1.83
SLC6A6-204ENST00000613060 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
SLC6A6-204ENST00000613060 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
SLC6A6-204ENST00000613060 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
SLC6A6-204ENST00000613060 MUC2Q02817 5179 aa3.51□□□□□ -1.85
SLC6A6-204ENST00000613060 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
SLC6A6-204ENST00000613060 MT1AP04731 61 aa3.48□□□□□ -1.85
SLC6A6-204ENST00000613060 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
SLC6A6-204ENST00000613060 PCLOQ9Y6V0 5065 aa3.46□□□□□ -1.85
SLC6A6-204ENST00000613060 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
SLC6A6-204ENST00000613060 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
SLC6A6-204ENST00000613060 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SLC6A6-204ENST00000613060 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
SLC6A6-204ENST00000613060 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.4□□□□□ -1.87
SLC6A6-204ENST00000613060 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
SLC6A6-204ENST00000613060 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
SLC6A6-204ENST00000613060 KRTAP6-3Q3LI67 103 aa3.34□□□□□ -1.88
SLC6A6-204ENST00000613060 FAT4Q6V0I7 4981 aa3.26□□□□□ -1.89
SLC6A6-204ENST00000613060 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
SLC6A6-204ENST00000613060 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
SLC6A6-204ENST00000613060 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
SLC6A6-204ENST00000613060 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
SLC6A6-204ENST00000613060 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
SLC6A6-204ENST00000613060 KMT2DO14686 5537 aa3.13□□□□□ -1.91
SLC6A6-204ENST00000613060 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
SLC6A6-204ENST00000613060 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
SLC6A6-204ENST00000613060 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
SLC6A6-204ENST00000613060 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
SLC6A6-204ENST00000613060 RNF213Q63HN8 5207 aa3.01□□□□□ -1.93
SLC6A6-204ENST00000613060 KRTAP4-12Q9BQ66 201 aa3.01□□□□□ -1.93
SLC6A6-204ENST00000613060 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
SLC6A6-204ENST00000613060 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
SLC6A6-204ENST00000613060 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
SLC6A6-204ENST00000613060 USH2AO75445 5202 aa2.85□□□□□ -1.95
SLC6A6-204ENST00000613060 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.95
SLC6A6-204ENST00000613060 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
SLC6A6-204ENST00000613060 NEBP20929 6669 aa2.75□□□□□ -1.97
SLC6A6-204ENST00000613060 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
SLC6A6-204ENST00000613060 MUC12Q9UKN1 5478 aa2.68□□□□□ -1.98
SLC6A6-204ENST00000613060 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
SLC6A6-204ENST00000613060 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
SLC6A6-204ENST00000613060 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
SLC6A6-204ENST00000613060 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
SLC6A6-204ENST00000613060 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
SLC6A6-204ENST00000613060 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SLC6A6-204ENST00000613060 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
SLC6A6-204ENST00000613060 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
SLC6A6-204ENST00000613060 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
SLC6A6-204ENST00000613060 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
SLC6A6-204ENST00000613060 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.07
SLC6A6-204ENST00000613060 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
SLC6A6-204ENST00000613060 KRTAP5-8O75690 187 aa1.99□□□□□ -2.09
SLC6A6-204ENST00000613060 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
SLC6A6-204ENST00000613060 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
SLC6A6-204ENST00000613060 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
SLC6A6-204ENST00000613060 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
SLC6A6-204ENST00000613060 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
SLC6A6-204ENST00000613060 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
SLC6A6-204ENST00000613060 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.16
SLC6A6-204ENST00000613060 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.17
SLC6A6-204ENST00000613060 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.17
SLC6A6-204ENST00000613060 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
SLC6A6-204ENST00000613060 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
SLC6A6-204ENST00000613060 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 173 ms