RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 PRM1P04553 51 aa4.35□□□□□ -1.71
SYNRG-217ENST00000612223 LRP2P98164 4655 aa4.34□□□□□ -1.71
SYNRG-217ENST00000612223 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
SYNRG-217ENST00000612223 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
SYNRG-217ENST00000612223 HYDINQ4G0P3 5121 aa4.25□□□□□ -1.73
SYNRG-217ENST00000612223 MUC17Q685J3 4493 aa4.25□□□□□ -1.73
SYNRG-217ENST00000612223 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
SYNRG-217ENST00000612223 TNXBP22105 4242 aa4.21□□□□□ -1.74
SYNRG-217ENST00000612223 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
SYNRG-217ENST00000612223 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
SYNRG-217ENST00000612223 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
SYNRG-217ENST00000612223 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
SYNRG-217ENST00000612223 LCE2AQ5TA79 106 aaPredicted RBP4.16□□□□□ -1.74
SYNRG-217ENST00000612223 MT1AP04731 61 aa4.15□□□□□ -1.75
SYNRG-217ENST00000612223 KRTAP6-3Q3LI67 103 aa4.11□□□□□ -1.75
SYNRG-217ENST00000612223 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
SYNRG-217ENST00000612223 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
SYNRG-217ENST00000612223 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
SYNRG-217ENST00000612223 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
SYNRG-217ENST00000612223 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
SYNRG-217ENST00000612223 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
SYNRG-217ENST00000612223 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
SYNRG-217ENST00000612223 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
SYNRG-217ENST00000612223 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
SYNRG-217ENST00000612223 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
SYNRG-217ENST00000612223 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
SYNRG-217ENST00000612223 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
SYNRG-217ENST00000612223 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
SYNRG-217ENST00000612223 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
SYNRG-217ENST00000612223 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.78
SYNRG-217ENST00000612223 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
SYNRG-217ENST00000612223 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
SYNRG-217ENST00000612223 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SYNRG-217ENST00000612223 RNF213Q63HN8 5207 aa3.82□□□□□ -1.8
SYNRG-217ENST00000612223 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
SYNRG-217ENST00000612223 MUC2Q02817 5179 aa3.8□□□□□ -1.8
SYNRG-217ENST00000612223 UBR4Q5T4S7 5183 aa3.75□□□□□ -1.81
SYNRG-217ENST00000612223 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
SYNRG-217ENST00000612223 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
SYNRG-217ENST00000612223 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
SYNRG-217ENST00000612223 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
SYNRG-217ENST00000612223 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
SYNRG-217ENST00000612223 NEBP20929 6669 aa3.28□□□□□ -1.88
SYNRG-217ENST00000612223 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
SYNRG-217ENST00000612223 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
SYNRG-217ENST00000612223 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
SYNRG-217ENST00000612223 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
SYNRG-217ENST00000612223 USH2AO75445 5202 aa3.21□□□□□ -1.9
SYNRG-217ENST00000612223 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
SYNRG-217ENST00000612223 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
SYNRG-217ENST00000612223 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
SYNRG-217ENST00000612223 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
SYNRG-217ENST00000612223 KMT2DO14686 5537 aa3.04□□□□□ -1.92
SYNRG-217ENST00000612223 SSPOA2VEC9 5147 aa2.99□□□□□ -1.93
SYNRG-217ENST00000612223 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
SYNRG-217ENST00000612223 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
SYNRG-217ENST00000612223 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
SYNRG-217ENST00000612223 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SYNRG-217ENST00000612223 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
SYNRG-217ENST00000612223 MUC12Q9UKN1 5478 aa2.67□□□□□ -1.98
SYNRG-217ENST00000612223 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
SYNRG-217ENST00000612223 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
SYNRG-217ENST00000612223 KRTAP5-8O75690 187 aa2.46□□□□□ -2.01
SYNRG-217ENST00000612223 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
SYNRG-217ENST00000612223 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
SYNRG-217ENST00000612223 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
SYNRG-217ENST00000612223 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.07
SYNRG-217ENST00000612223 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
SYNRG-217ENST00000612223 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
SYNRG-217ENST00000612223 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
SYNRG-217ENST00000612223 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
SYNRG-217ENST00000612223 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
SYNRG-217ENST00000612223 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
SYNRG-217ENST00000612223 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
SYNRG-217ENST00000612223 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
SYNRG-217ENST00000612223 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
SYNRG-217ENST00000612223 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 78.1 ms