RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
SVOP-205ENST00000610966 MT1MQ8N339 61 aa2.99□□□□□ -1.93
SVOP-205ENST00000610966 ABCA13Q86UQ4 5058 aa2.96□□□□□ -1.94
SVOP-205ENST00000610966 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
SVOP-205ENST00000610966 LCE2AQ5TA79 106 aaPredicted RBP2.94□□□□□ -1.94
SVOP-205ENST00000610966 LOC100996750A0A140TA64 210 aa2.92□□□□□ -1.94
SVOP-205ENST00000610966 MT3P25713 68 aa2.92□□□□□ -1.94
SVOP-205ENST00000610966 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
SVOP-205ENST00000610966 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
SVOP-205ENST00000610966 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
SVOP-205ENST00000610966 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
SVOP-205ENST00000610966 KRTAP9-7A8MTY7 169 aa2.86□□□□□ -1.95
SVOP-205ENST00000610966 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
SVOP-205ENST00000610966 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
SVOP-205ENST00000610966 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
SVOP-205ENST00000610966 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.96
SVOP-205ENST00000610966 PRM1P04553 51 aa2.82□□□□□ -1.96
SVOP-205ENST00000610966 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
SVOP-205ENST00000610966 KRTAP20-1Q3LI63 56 aa2.81□□□□□ -1.96
SVOP-205ENST00000610966 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SVOP-205ENST00000610966 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
SVOP-205ENST00000610966 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SVOP-205ENST00000610966 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
SVOP-205ENST00000610966 MT1AP04731 61 aa2.78□□□□□ -1.96
SVOP-205ENST00000610966 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
SVOP-205ENST00000610966 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SVOP-205ENST00000610966 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SVOP-205ENST00000610966 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SVOP-205ENST00000610966 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
SVOP-205ENST00000610966 MUC2Q02817 5179 aa2.72□□□□□ -1.97
SVOP-205ENST00000610966 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.98
SVOP-205ENST00000610966 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
SVOP-205ENST00000610966 SYNE2Q8WXH0 6885 aaKnown RBP2.65□□□□□ -1.99
SVOP-205ENST00000610966 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
SVOP-205ENST00000610966 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
SVOP-205ENST00000610966 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
SVOP-205ENST00000610966 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
SVOP-205ENST00000610966 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
SVOP-205ENST00000610966 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
SVOP-205ENST00000610966 FCGBPQ9Y6R7 5405 aaPredicted RBP2.43□□□□□ -2.02
SVOP-205ENST00000610966 USH2AO75445 5202 aa2.41□□□□□ -2.02
SVOP-205ENST00000610966 DSTQ03001 7570 aaKnown RBP2.34□□□□□ -2.04
SVOP-205ENST00000610966 NEBP20929 6669 aa2.33□□□□□ -2.04
SVOP-205ENST00000610966 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
SVOP-205ENST00000610966 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
SVOP-205ENST00000610966 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
SVOP-205ENST00000610966 KMT2DO14686 5537 aa2.31□□□□□ -2.04
SVOP-205ENST00000610966 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
SVOP-205ENST00000610966 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
SVOP-205ENST00000610966 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
SVOP-205ENST00000610966 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SVOP-205ENST00000610966 KRTAP4-12Q9BQ66 201 aa2.17□□□□□ -2.06
SVOP-205ENST00000610966 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
SVOP-205ENST00000610966 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
SVOP-205ENST00000610966 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
SVOP-205ENST00000610966 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
SVOP-205ENST00000610966 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
SVOP-205ENST00000610966 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
SVOP-205ENST00000610966 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
SVOP-205ENST00000610966 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
SVOP-205ENST00000610966 KRTAP5-3Q6L8H2 238 aa1.81□□□□□ -2.12
SVOP-205ENST00000610966 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
SVOP-205ENST00000610966 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
SVOP-205ENST00000610966 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
SVOP-205ENST00000610966 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
SVOP-205ENST00000610966 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
SVOP-205ENST00000610966 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
SVOP-205ENST00000610966 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
SVOP-205ENST00000610966 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
SVOP-205ENST00000610966 KRTAP5-2Q701N4 177 aa1.55□□□□□ -2.16
SVOP-205ENST00000610966 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.18
SVOP-205ENST00000610966 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
SVOP-205ENST00000610966 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
SVOP-205ENST00000610966 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
SVOP-205ENST00000610966 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.23□□□□□ -2.21
SVOP-205ENST00000610966 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
SVOP-205ENST00000610966 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 68.2 ms