RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
COL15A1-205ENST00000610452 EPPK1P58107 5090 aaKnown RBP6.06□□□□□ -1.44
COL15A1-205ENST00000610452 MT1MQ8N339 61 aa6.01□□□□□ -1.45
COL15A1-205ENST00000610452 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
COL15A1-205ENST00000610452 MT3P25713 68 aa5.96□□□□□ -1.45
COL15A1-205ENST00000610452 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
COL15A1-205ENST00000610452 HMCN2Q8NDA2 5059 aa5.91□□□□□ -1.46
COL15A1-205ENST00000610452 KRTAP19-7Q3SYF9 63 aa5.9□□□□□ -1.46
COL15A1-205ENST00000610452 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
COL15A1-205ENST00000610452 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
COL15A1-205ENST00000610452 RNF213Q63HN8 5207 aa5.78□□□□□ -1.48
COL15A1-205ENST00000610452 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.49
COL15A1-205ENST00000610452 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
COL15A1-205ENST00000610452 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
COL15A1-205ENST00000610452 MT1AP04731 61 aa5.68□□□□□ -1.5
COL15A1-205ENST00000610452 MUC2Q02817 5179 aa5.63□□□□□ -1.51
COL15A1-205ENST00000610452 LCE1BQ5T7P3 118 aa5.61□□□□□ -1.51
COL15A1-205ENST00000610452 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
COL15A1-205ENST00000610452 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
COL15A1-205ENST00000610452 LCE1DQ5T752 114 aa5.57□□□□□ -1.52
COL15A1-205ENST00000610452 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
COL15A1-205ENST00000610452 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
COL15A1-205ENST00000610452 LCE2AQ5TA79 106 aaPredicted RBP5.52□□□□□ -1.53
COL15A1-205ENST00000610452 MT4P47944 62 aa5.46□□□□□ -1.54
COL15A1-205ENST00000610452 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
COL15A1-205ENST00000610452 KRTAP6-1Q3LI64 71 aa5.36□□□□□ -1.55
COL15A1-205ENST00000610452 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
COL15A1-205ENST00000610452 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
COL15A1-205ENST00000610452 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
COL15A1-205ENST00000610452 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
COL15A1-205ENST00000610452 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
COL15A1-205ENST00000610452 USH2AO75445 5202 aa5.16□□□□□ -1.58
COL15A1-205ENST00000610452 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
COL15A1-205ENST00000610452 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
COL15A1-205ENST00000610452 KMT2DO14686 5537 aa5□□□□□ -1.61
COL15A1-205ENST00000610452 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
COL15A1-205ENST00000610452 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
COL15A1-205ENST00000610452 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
COL15A1-205ENST00000610452 LCE4AQ5TA78 99 aa4.68□□□□□ -1.66
COL15A1-205ENST00000610452 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
COL15A1-205ENST00000610452 LCE1CQ5T751 118 aa4.61□□□□□ -1.67
COL15A1-205ENST00000610452 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
COL15A1-205ENST00000610452 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
COL15A1-205ENST00000610452 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
COL15A1-205ENST00000610452 MUC19Q7Z5P9 8384 aa4.59□□□□□ -1.67
COL15A1-205ENST00000610452 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
COL15A1-205ENST00000610452 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
COL15A1-205ENST00000610452 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
COL15A1-205ENST00000610452 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
COL15A1-205ENST00000610452 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
COL15A1-205ENST00000610452 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
COL15A1-205ENST00000610452 KRTAP4-6Q9BYQ5 205 aa4.21□□□□□ -1.74
COL15A1-205ENST00000610452 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
COL15A1-205ENST00000610452 NEBP20929 6669 aa4.07□□□□□ -1.76
COL15A1-205ENST00000610452 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
COL15A1-205ENST00000610452 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
COL15A1-205ENST00000610452 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
COL15A1-205ENST00000610452 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
COL15A1-205ENST00000610452 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
COL15A1-205ENST00000610452 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
COL15A1-205ENST00000610452 GPR98Q8WXG9 6306 aa3.52□□□□□ -1.85
COL15A1-205ENST00000610452 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
COL15A1-205ENST00000610452 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
COL15A1-205ENST00000610452 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
COL15A1-205ENST00000610452 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
COL15A1-205ENST00000610452 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
COL15A1-205ENST00000610452 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
COL15A1-205ENST00000610452 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
COL15A1-205ENST00000610452 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
COL15A1-205ENST00000610452 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
COL15A1-205ENST00000610452 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
COL15A1-205ENST00000610452 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
COL15A1-205ENST00000610452 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
COL15A1-205ENST00000610452 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
COL15A1-205ENST00000610452 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
COL15A1-205ENST00000610452 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
COL15A1-205ENST00000610452 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 118.8 ms