RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
PCDHB16-201ENST00000609684 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
PCDHB16-201ENST00000609684 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
PCDHB16-201ENST00000609684 MT1MQ8N339 61 aa4.52□□□□□ -1.69
PCDHB16-201ENST00000609684 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
PCDHB16-201ENST00000609684 LOC100996750A0A140TA64 210 aa4.45□□□□□ -1.7
PCDHB16-201ENST00000609684 KRTAP4-3Q9BYR4 195 aa4.45□□□□□ -1.7
PCDHB16-201ENST00000609684 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
PCDHB16-201ENST00000609684 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
PCDHB16-201ENST00000609684 MUC2Q02817 5179 aa4.35□□□□□ -1.71
PCDHB16-201ENST00000609684 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.72
PCDHB16-201ENST00000609684 MT3P25713 68 aa4.29□□□□□ -1.72
PCDHB16-201ENST00000609684 MT4P47944 62 aa4.24□□□□□ -1.73
PCDHB16-201ENST00000609684 PRM1P04553 51 aa4.18□□□□□ -1.74
PCDHB16-201ENST00000609684 MT1AP04731 61 aa4.17□□□□□ -1.74
PCDHB16-201ENST00000609684 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
PCDHB16-201ENST00000609684 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
PCDHB16-201ENST00000609684 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
PCDHB16-201ENST00000609684 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
PCDHB16-201ENST00000609684 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
PCDHB16-201ENST00000609684 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
PCDHB16-201ENST00000609684 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.76
PCDHB16-201ENST00000609684 KRTAP9-6A0A140TA67 174 aa4.04□□□□□ -1.76
PCDHB16-201ENST00000609684 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
PCDHB16-201ENST00000609684 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
PCDHB16-201ENST00000609684 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
PCDHB16-201ENST00000609684 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
PCDHB16-201ENST00000609684 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
PCDHB16-201ENST00000609684 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
PCDHB16-201ENST00000609684 USH2AO75445 5202 aa3.95□□□□□ -1.78
PCDHB16-201ENST00000609684 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
PCDHB16-201ENST00000609684 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
PCDHB16-201ENST00000609684 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
PCDHB16-201ENST00000609684 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.8
PCDHB16-201ENST00000609684 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
PCDHB16-201ENST00000609684 KMT2DO14686 5537 aa3.82□□□□□ -1.8
PCDHB16-201ENST00000609684 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
PCDHB16-201ENST00000609684 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
PCDHB16-201ENST00000609684 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
PCDHB16-201ENST00000609684 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
PCDHB16-201ENST00000609684 MACF1Q9UPN3 7388 aaKnown RBP3.62□□□□□ -1.83
PCDHB16-201ENST00000609684 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.84
PCDHB16-201ENST00000609684 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
PCDHB16-201ENST00000609684 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
PCDHB16-201ENST00000609684 NEBP20929 6669 aa3.38□□□□□ -1.87
PCDHB16-201ENST00000609684 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
PCDHB16-201ENST00000609684 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
PCDHB16-201ENST00000609684 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
PCDHB16-201ENST00000609684 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
PCDHB16-201ENST00000609684 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
PCDHB16-201ENST00000609684 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
PCDHB16-201ENST00000609684 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
PCDHB16-201ENST00000609684 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
PCDHB16-201ENST00000609684 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
PCDHB16-201ENST00000609684 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.92
PCDHB16-201ENST00000609684 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
PCDHB16-201ENST00000609684 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
PCDHB16-201ENST00000609684 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PCDHB16-201ENST00000609684 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
PCDHB16-201ENST00000609684 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.96
PCDHB16-201ENST00000609684 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
PCDHB16-201ENST00000609684 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
PCDHB16-201ENST00000609684 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
PCDHB16-201ENST00000609684 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
PCDHB16-201ENST00000609684 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
PCDHB16-201ENST00000609684 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
PCDHB16-201ENST00000609684 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
PCDHB16-201ENST00000609684 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
PCDHB16-201ENST00000609684 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
PCDHB16-201ENST00000609684 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
PCDHB16-201ENST00000609684 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
PCDHB16-201ENST00000609684 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
PCDHB16-201ENST00000609684 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
PCDHB16-201ENST00000609684 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
PCDHB16-201ENST00000609684 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PCDHB16-201ENST00000609684 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
PCDHB16-201ENST00000609684 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 476.2 ms