RNA–Protein interactions for RNA: ENST00000597389.5

SPTBN4-211, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 5

Gene SPTBN4, Length 5,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-211ENST00000597389 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
SPTBN4-211ENST00000597389 KRTAP19-6Q3LI70 58 aa6.11□□□□□ -1.43
SPTBN4-211ENST00000597389 PRM1P04553 51 aa6.08□□□□□ -1.44
SPTBN4-211ENST00000597389 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
SPTBN4-211ENST00000597389 KMT2CQ8NEZ4 4911 aaKnown RBP6.01□□□□□ -1.45
SPTBN4-211ENST00000597389 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
SPTBN4-211ENST00000597389 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
SPTBN4-211ENST00000597389 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
SPTBN4-211ENST00000597389 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
SPTBN4-211ENST00000597389 KRTAP20-1Q3LI63 56 aa5.82□□□□□ -1.48
SPTBN4-211ENST00000597389 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
SPTBN4-211ENST00000597389 MT1AP04731 61 aa5.75□□□□□ -1.49
SPTBN4-211ENST00000597389 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
SPTBN4-211ENST00000597389 LCE2AQ5TA79 106 aaPredicted RBP5.69□□□□□ -1.5
SPTBN4-211ENST00000597389 ABCA13Q86UQ4 5058 aa5.67□□□□□ -1.5
SPTBN4-211ENST00000597389 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.51
SPTBN4-211ENST00000597389 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
SPTBN4-211ENST00000597389 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
SPTBN4-211ENST00000597389 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
SPTBN4-211ENST00000597389 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
SPTBN4-211ENST00000597389 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
SPTBN4-211ENST00000597389 FAT4Q6V0I7 4981 aa5.5□□□□□ -1.53
SPTBN4-211ENST00000597389 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
SPTBN4-211ENST00000597389 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
SPTBN4-211ENST00000597389 RNF213Q63HN8 5207 aa5.46□□□□□ -1.54
SPTBN4-211ENST00000597389 HMCN2Q8NDA2 5059 aa5.45□□□□□ -1.54
SPTBN4-211ENST00000597389 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
SPTBN4-211ENST00000597389 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
SPTBN4-211ENST00000597389 LCE1CQ5T751 118 aa5.38□□□□□ -1.55
SPTBN4-211ENST00000597389 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
SPTBN4-211ENST00000597389 LCE1FQ5T754 118 aa5.38□□□□□ -1.55
SPTBN4-211ENST00000597389 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
SPTBN4-211ENST00000597389 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
SPTBN4-211ENST00000597389 KRTAP9-6A8MVA2 160 aa5.36□□□□□ -1.55
SPTBN4-211ENST00000597389 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.36□□□□□ -1.55
SPTBN4-211ENST00000597389 MUC2Q02817 5179 aa5.35□□□□□ -1.55
SPTBN4-211ENST00000597389 KRTAP9-4Q9BYQ2 154 aa5.35□□□□□ -1.55
SPTBN4-211ENST00000597389 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
SPTBN4-211ENST00000597389 KRTAP2-2Q9BYT5 123 aa5.27□□□□□ -1.57
SPTBN4-211ENST00000597389 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
SPTBN4-211ENST00000597389 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
SPTBN4-211ENST00000597389 USH2AO75445 5202 aa4.62□□□□□ -1.67
SPTBN4-211ENST00000597389 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
SPTBN4-211ENST00000597389 KMT2DO14686 5537 aa4.61□□□□□ -1.67
SPTBN4-211ENST00000597389 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
SPTBN4-211ENST00000597389 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
SPTBN4-211ENST00000597389 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
SPTBN4-211ENST00000597389 NEBP20929 6669 aa4.48□□□□□ -1.69
SPTBN4-211ENST00000597389 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
SPTBN4-211ENST00000597389 KRTAP5-9P26371 169 aa4.4□□□□□ -1.7
SPTBN4-211ENST00000597389 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
SPTBN4-211ENST00000597389 KRTAP4-4Q9BYR3 166 aa4.32□□□□□ -1.72
SPTBN4-211ENST00000597389 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
SPTBN4-211ENST00000597389 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
SPTBN4-211ENST00000597389 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
SPTBN4-211ENST00000597389 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
SPTBN4-211ENST00000597389 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
SPTBN4-211ENST00000597389 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
SPTBN4-211ENST00000597389 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
SPTBN4-211ENST00000597389 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
SPTBN4-211ENST00000597389 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
SPTBN4-211ENST00000597389 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
SPTBN4-211ENST00000597389 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
SPTBN4-211ENST00000597389 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
SPTBN4-211ENST00000597389 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
SPTBN4-211ENST00000597389 KRTAP5-10Q6L8G5 202 aa3.13□□□□□ -1.91
SPTBN4-211ENST00000597389 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
SPTBN4-211ENST00000597389 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
SPTBN4-211ENST00000597389 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
SPTBN4-211ENST00000597389 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
SPTBN4-211ENST00000597389 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SPTBN4-211ENST00000597389 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
SPTBN4-211ENST00000597389 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
SPTBN4-211ENST00000597389 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SPTBN4-211ENST00000597389 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SPTBN4-211ENST00000597389 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
SPTBN4-211ENST00000597389 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
SPTBN4-211ENST00000597389 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 39.8 ms