RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
FARP1-219ENST00000596580 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
FARP1-219ENST00000596580 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
FARP1-219ENST00000596580 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
FARP1-219ENST00000596580 PRM1P04553 51 aa2.34□□□□□ -2.03
FARP1-219ENST00000596580 KRTAP9-2Q9BYQ4 174 aa2.32□□□□□ -2.04
FARP1-219ENST00000596580 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
FARP1-219ENST00000596580 LCE2AQ5TA79 106 aaPredicted RBP2.3□□□□□ -2.04
FARP1-219ENST00000596580 HMCN2Q8NDA2 5059 aa2.29□□□□□ -2.04
FARP1-219ENST00000596580 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
FARP1-219ENST00000596580 KRTAP4-7Q9BYR0 210 aa2.27□□□□□ -2.05
FARP1-219ENST00000596580 MT4P47944 62 aa2.27□□□□□ -2.05
FARP1-219ENST00000596580 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
FARP1-219ENST00000596580 LCE4AQ5TA78 99 aa2.25□□□□□ -2.05
FARP1-219ENST00000596580 LPAP08519 4548 aa2.23□□□□□ -2.05
FARP1-219ENST00000596580 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
FARP1-219ENST00000596580 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
FARP1-219ENST00000596580 LCE5AQ5TCM9 118 aa2.21□□□□□ -2.06
FARP1-219ENST00000596580 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
FARP1-219ENST00000596580 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
FARP1-219ENST00000596580 KRTAP9-6A0A140TA67 174 aa2.19□□□□□ -2.06
FARP1-219ENST00000596580 LOC100996750A0A140TA64 210 aa2.18□□□□□ -2.06
FARP1-219ENST00000596580 KRTAP9-4Q9BYQ2 154 aa2.15□□□□□ -2.07
FARP1-219ENST00000596580 KRTAP4-3Q9BYR4 195 aa2.11□□□□□ -2.07
FARP1-219ENST00000596580 MUC2Q02817 5179 aa2.1□□□□□ -2.07
FARP1-219ENST00000596580 KRTAP6-1Q3LI64 71 aa2.09□□□□□ -2.07
FARP1-219ENST00000596580 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
FARP1-219ENST00000596580 KRTAP2-2Q9BYT5 123 aa2.07□□□□□ -2.08
FARP1-219ENST00000596580 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
FARP1-219ENST00000596580 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
FARP1-219ENST00000596580 MDN1Q9NU22 5596 aa2.03□□□□□ -2.08
FARP1-219ENST00000596580 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.02□□□□□ -2.09
FARP1-219ENST00000596580 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
FARP1-219ENST00000596580 SYNE2Q8WXH0 6885 aaKnown RBP2□□□□□ -2.09
FARP1-219ENST00000596580 KRTAP4-9Q9BYQ8 210 aa1.98□□□□□ -2.09
FARP1-219ENST00000596580 FSIP2Q5CZC0 6907 aa1.96□□□□□ -2.1
FARP1-219ENST00000596580 KRTAP9-9Q9BYP9 154 aa1.94□□□□□ -2.1
FARP1-219ENST00000596580 KRTAP5-9P26371 169 aa1.94□□□□□ -2.1
FARP1-219ENST00000596580 USH2AO75445 5202 aa1.93□□□□□ -2.1
FARP1-219ENST00000596580 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
FARP1-219ENST00000596580 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
FARP1-219ENST00000596580 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
FARP1-219ENST00000596580 NEBP20929 6669 aa1.88□□□□□ -2.11
FARP1-219ENST00000596580 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.12
FARP1-219ENST00000596580 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.12
FARP1-219ENST00000596580 SSPOA2VEC9 5147 aa1.83□□□□□ -2.12
FARP1-219ENST00000596580 KMT2DO14686 5537 aa1.8□□□□□ -2.12
FARP1-219ENST00000596580 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
FARP1-219ENST00000596580 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
FARP1-219ENST00000596580 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
FARP1-219ENST00000596580 OBSCNQ5VST9 7968 aa1.72□□□□□ -2.13
FARP1-219ENST00000596580 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
FARP1-219ENST00000596580 KRTAP4-6Q9BYQ5 205 aa1.62□□□□□ -2.15
FARP1-219ENST00000596580 KRTAP4-11Q9BYQ6 195 aa1.62□□□□□ -2.15
FARP1-219ENST00000596580 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
FARP1-219ENST00000596580 KRTAP5-5Q701N2 237 aaPredicted RBP1.59□□□□□ -2.15
FARP1-219ENST00000596580 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
FARP1-219ENST00000596580 MACF1Q9UPN3 7388 aaKnown RBP1.56□□□□□ -2.16
FARP1-219ENST00000596580 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
FARP1-219ENST00000596580 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
FARP1-219ENST00000596580 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
FARP1-219ENST00000596580 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
FARP1-219ENST00000596580 KRTAP4-12Q9BQ66 201 aa1.4□□□□□ -2.19
FARP1-219ENST00000596580 KRTAP4-2Q9BYR5 136 aa1.4□□□□□ -2.19
FARP1-219ENST00000596580 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
FARP1-219ENST00000596580 KRTAP5-2Q701N4 177 aa1.35□□□□□ -2.19
FARP1-219ENST00000596580 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
FARP1-219ENST00000596580 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
FARP1-219ENST00000596580 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
FARP1-219ENST00000596580 KRTAP5-8O75690 187 aa1.22□□□□□ -2.21
FARP1-219ENST00000596580 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
FARP1-219ENST00000596580 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
FARP1-219ENST00000596580 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
FARP1-219ENST00000596580 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
FARP1-219ENST00000596580 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
FARP1-219ENST00000596580 KRTAP5-7Q6L8G8 165 aa1.01□□□□□ -2.25
FARP1-219ENST00000596580 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 23.5 ms