RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
TUBGCP4-208ENST00000564079 MT1EP04732 61 aa3.85□□□□□ -1.79
TUBGCP4-208ENST00000564079 MT3P25713 68 aa3.81□□□□□ -1.8
TUBGCP4-208ENST00000564079 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
TUBGCP4-208ENST00000564079 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
TUBGCP4-208ENST00000564079 MT1MQ8N339 61 aa3.79□□□□□ -1.8
TUBGCP4-208ENST00000564079 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
TUBGCP4-208ENST00000564079 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
TUBGCP4-208ENST00000564079 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
TUBGCP4-208ENST00000564079 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
TUBGCP4-208ENST00000564079 FLGP20930 4061 aaPredicted RBP3.7□□□□□ -1.82
TUBGCP4-208ENST00000564079 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
TUBGCP4-208ENST00000564079 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.82
TUBGCP4-208ENST00000564079 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.82
TUBGCP4-208ENST00000564079 SYNE2Q8WXH0 6885 aaKnown RBP3.64□□□□□ -1.83
TUBGCP4-208ENST00000564079 LCE2AQ5TA79 106 aaPredicted RBP3.62□□□□□ -1.83
TUBGCP4-208ENST00000564079 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
TUBGCP4-208ENST00000564079 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
TUBGCP4-208ENST00000564079 PRM1P04553 51 aa3.58□□□□□ -1.84
TUBGCP4-208ENST00000564079 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
TUBGCP4-208ENST00000564079 RNF213Q63HN8 5207 aa3.55□□□□□ -1.84
TUBGCP4-208ENST00000564079 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
TUBGCP4-208ENST00000564079 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
TUBGCP4-208ENST00000564079 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
TUBGCP4-208ENST00000564079 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
TUBGCP4-208ENST00000564079 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
TUBGCP4-208ENST00000564079 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
TUBGCP4-208ENST00000564079 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
TUBGCP4-208ENST00000564079 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
TUBGCP4-208ENST00000564079 MT1AP04731 61 aa3.46□□□□□ -1.86
TUBGCP4-208ENST00000564079 MUC2Q02817 5179 aa3.45□□□□□ -1.86
TUBGCP4-208ENST00000564079 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
TUBGCP4-208ENST00000564079 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
TUBGCP4-208ENST00000564079 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
TUBGCP4-208ENST00000564079 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
TUBGCP4-208ENST00000564079 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
TUBGCP4-208ENST00000564079 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
TUBGCP4-208ENST00000564079 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
TUBGCP4-208ENST00000564079 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
TUBGCP4-208ENST00000564079 USH2AO75445 5202 aa2.98□□□□□ -1.93
TUBGCP4-208ENST00000564079 NEBP20929 6669 aa2.96□□□□□ -1.94
TUBGCP4-208ENST00000564079 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
TUBGCP4-208ENST00000564079 KMT2DO14686 5537 aa2.93□□□□□ -1.94
TUBGCP4-208ENST00000564079 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
TUBGCP4-208ENST00000564079 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.94
TUBGCP4-208ENST00000564079 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
TUBGCP4-208ENST00000564079 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
TUBGCP4-208ENST00000564079 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
TUBGCP4-208ENST00000564079 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
TUBGCP4-208ENST00000564079 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
TUBGCP4-208ENST00000564079 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
TUBGCP4-208ENST00000564079 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
TUBGCP4-208ENST00000564079 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
TUBGCP4-208ENST00000564079 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
TUBGCP4-208ENST00000564079 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.98
TUBGCP4-208ENST00000564079 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
TUBGCP4-208ENST00000564079 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
TUBGCP4-208ENST00000564079 MDN1Q9NU22 5596 aa2.49□□□□□ -2.01
TUBGCP4-208ENST00000564079 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
TUBGCP4-208ENST00000564079 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
TUBGCP4-208ENST00000564079 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
TUBGCP4-208ENST00000564079 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
TUBGCP4-208ENST00000564079 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
TUBGCP4-208ENST00000564079 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
TUBGCP4-208ENST00000564079 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
TUBGCP4-208ENST00000564079 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
TUBGCP4-208ENST00000564079 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
TUBGCP4-208ENST00000564079 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.12
TUBGCP4-208ENST00000564079 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
TUBGCP4-208ENST00000564079 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.13
TUBGCP4-208ENST00000564079 KRTAP5-1Q6L8H4 278 aa1.68□□□□□ -2.14
TUBGCP4-208ENST00000564079 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
TUBGCP4-208ENST00000564079 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.17
TUBGCP4-208ENST00000564079 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
TUBGCP4-208ENST00000564079 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TUBGCP4-208ENST00000564079 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
TUBGCP4-208ENST00000564079 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 88.8 ms