RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
RPAP1-204ENST00000562303 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
RPAP1-204ENST00000562303 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
RPAP1-204ENST00000562303 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
RPAP1-204ENST00000562303 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
RPAP1-204ENST00000562303 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
RPAP1-204ENST00000562303 TNXBP22105 4242 aa3.32□□□□□ -1.88
RPAP1-204ENST00000562303 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
RPAP1-204ENST00000562303 MT1AP04731 61 aa3.26□□□□□ -1.89
RPAP1-204ENST00000562303 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
RPAP1-204ENST00000562303 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
RPAP1-204ENST00000562303 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
RPAP1-204ENST00000562303 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.9
RPAP1-204ENST00000562303 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
RPAP1-204ENST00000562303 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
RPAP1-204ENST00000562303 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
RPAP1-204ENST00000562303 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
RPAP1-204ENST00000562303 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
RPAP1-204ENST00000562303 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
RPAP1-204ENST00000562303 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
RPAP1-204ENST00000562303 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
RPAP1-204ENST00000562303 MUC2Q02817 5179 aa3.02□□□□□ -1.93
RPAP1-204ENST00000562303 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
RPAP1-204ENST00000562303 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
RPAP1-204ENST00000562303 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
RPAP1-204ENST00000562303 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
RPAP1-204ENST00000562303 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
RPAP1-204ENST00000562303 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
RPAP1-204ENST00000562303 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
RPAP1-204ENST00000562303 KMT2DO14686 5537 aa2.72□□□□□ -1.97
RPAP1-204ENST00000562303 USH2AO75445 5202 aa2.67□□□□□ -1.98
RPAP1-204ENST00000562303 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
RPAP1-204ENST00000562303 NEBP20929 6669 aa2.55□□□□□ -2
RPAP1-204ENST00000562303 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
RPAP1-204ENST00000562303 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
RPAP1-204ENST00000562303 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
RPAP1-204ENST00000562303 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
RPAP1-204ENST00000562303 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
RPAP1-204ENST00000562303 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
RPAP1-204ENST00000562303 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
RPAP1-204ENST00000562303 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
RPAP1-204ENST00000562303 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
RPAP1-204ENST00000562303 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
RPAP1-204ENST00000562303 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
RPAP1-204ENST00000562303 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
RPAP1-204ENST00000562303 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
RPAP1-204ENST00000562303 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
RPAP1-204ENST00000562303 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
RPAP1-204ENST00000562303 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
RPAP1-204ENST00000562303 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
RPAP1-204ENST00000562303 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
RPAP1-204ENST00000562303 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
RPAP1-204ENST00000562303 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
RPAP1-204ENST00000562303 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
RPAP1-204ENST00000562303 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
RPAP1-204ENST00000562303 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
RPAP1-204ENST00000562303 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
RPAP1-204ENST00000562303 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.18
RPAP1-204ENST00000562303 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
RPAP1-204ENST00000562303 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
RPAP1-204ENST00000562303 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 63.7 ms