RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
RPAP1-204ENST00000562303 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
RPAP1-204ENST00000562303 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
RPAP1-204ENST00000562303 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
RPAP1-204ENST00000562303 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
RPAP1-204ENST00000562303 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
RPAP1-204ENST00000562303 TNXBP22105 4242 aa3.32□□□□□ -1.88
RPAP1-204ENST00000562303 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
RPAP1-204ENST00000562303 MT1AP04731 61 aa3.26□□□□□ -1.89
RPAP1-204ENST00000562303 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
RPAP1-204ENST00000562303 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
RPAP1-204ENST00000562303 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
RPAP1-204ENST00000562303 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
RPAP1-204ENST00000562303 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.9
RPAP1-204ENST00000562303 FSIP2Q5CZC0 6907 aa3.14□□□□□ -1.91
RPAP1-204ENST00000562303 FAT4Q6V0I7 4981 aa3.1□□□□□ -1.91
RPAP1-204ENST00000562303 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
RPAP1-204ENST00000562303 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
RPAP1-204ENST00000562303 RNF213Q63HN8 5207 aa3.06□□□□□ -1.92
RPAP1-204ENST00000562303 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
RPAP1-204ENST00000562303 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
RPAP1-204ENST00000562303 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
RPAP1-204ENST00000562303 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
RPAP1-204ENST00000562303 MUC2Q02817 5179 aa3.02□□□□□ -1.93
RPAP1-204ENST00000562303 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
RPAP1-204ENST00000562303 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
RPAP1-204ENST00000562303 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
RPAP1-204ENST00000562303 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
RPAP1-204ENST00000562303 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
RPAP1-204ENST00000562303 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
RPAP1-204ENST00000562303 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
RPAP1-204ENST00000562303 KMT2DO14686 5537 aa2.72□□□□□ -1.97
RPAP1-204ENST00000562303 USH2AO75445 5202 aa2.67□□□□□ -1.98
RPAP1-204ENST00000562303 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
RPAP1-204ENST00000562303 NEBP20929 6669 aa2.55□□□□□ -2
RPAP1-204ENST00000562303 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
RPAP1-204ENST00000562303 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
RPAP1-204ENST00000562303 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
RPAP1-204ENST00000562303 KRTAP5-9P26371 169 aa2.48□□□□□ -2.01
RPAP1-204ENST00000562303 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
RPAP1-204ENST00000562303 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
RPAP1-204ENST00000562303 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
RPAP1-204ENST00000562303 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
RPAP1-204ENST00000562303 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
RPAP1-204ENST00000562303 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
RPAP1-204ENST00000562303 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
RPAP1-204ENST00000562303 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
RPAP1-204ENST00000562303 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
RPAP1-204ENST00000562303 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
RPAP1-204ENST00000562303 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
RPAP1-204ENST00000562303 KRTAP5-3Q6L8H2 238 aa1.99□□□□□ -2.09
RPAP1-204ENST00000562303 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
RPAP1-204ENST00000562303 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
RPAP1-204ENST00000562303 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
RPAP1-204ENST00000562303 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
RPAP1-204ENST00000562303 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
RPAP1-204ENST00000562303 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
RPAP1-204ENST00000562303 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
RPAP1-204ENST00000562303 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
RPAP1-204ENST00000562303 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
RPAP1-204ENST00000562303 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.18
RPAP1-204ENST00000562303 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
RPAP1-204ENST00000562303 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
RPAP1-204ENST00000562303 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 78.1 ms