RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	KRTAP19-8	Q3LI54	63 aa		0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	MUC2	Q02817	5179 aa		0	□□□□□ -2.41
SLTM-223	ENST00000560532		A0A096LPF7	62 aa		0	□□□□□ -2.41
SLTM-223	ENST00000560532	SSPO	A2VEC9	5147 aa		0	□□□□□ -2.41
SLTM-223	ENST00000560532	MT1G	P13640	62 aa		0	□□□□□ -2.41
SLTM-223	ENST00000560532	SMG1	Q96Q15	3661 aa	Known RBP	0	□□□□□ -2.41
SLTM-223	ENST00000560532	PCLO	Q9Y6V0	5065 aa		-0	□□□□□ -2.41
SLTM-223	ENST00000560532	FAT3	Q8TDW7	4589 aa		-0	□□□□□ -2.41
SLTM-223	ENST00000560532	TRRAP	Q9Y4A5	3859 aa		-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	MKI67	P46013	3256 aa	Known RBP	-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	MUC17	Q685J3	4493 aa		-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	APELA	P0DMC3	54 aa		-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	MT4	P47944	62 aa		-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	SZT2	Q5T011	3432 aa		-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	DMD	P11532	3685 aa		-0.01	□□□□□ -2.41
SLTM-223	ENST00000560532	PCNT	O95613	3336 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	DNAH17	Q9UFH2	4485 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	VPS13C	Q709C8	3753 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	BOD1L1	Q8NFC6	3051 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	MUC12	Q9UKN1	5478 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	SYNE2	Q8WXH0	6885 aa	Known RBP	-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	APOB	P04114	4563 aa	Known RBP	-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	XIRP2	A4UGR9	3374 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	MUC3A	Q02505	3323 aa		-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	DST	Q03001	7570 aa	Known RBP	-0.02	□□□□□ -2.41
SLTM-223	ENST00000560532	KMT2C	Q8NEZ4	4911 aa	Known RBP	-0.03	□□□□□ -2.41
SLTM-223	ENST00000560532	FSIP2	Q5CZC0	6907 aa		-0.03	□□□□□ -2.41
SLTM-223	ENST00000560532	MT1B	P07438	61 aa		-0.03	□□□□□ -2.41
SLTM-223	ENST00000560532	CEP350	Q5VT06	3117 aa		-0.03	□□□□□ -2.41
SLTM-223	ENST00000560532	MACF1	Q9UPN3	7388 aa	Known RBP	-0.03	□□□□□ -2.41
SLTM-223	ENST00000560532	DNAH10	Q8IVF4	4471 aa		-0.03	□□□□□ -2.41
SLTM-223	ENST00000560532	RYR1	P21817	5038 aa		-0.04	□□□□□ -2.42
SLTM-223	ENST00000560532	WDFY4	Q6ZS81	3184 aa		-0.04	□□□□□ -2.42
SLTM-223	ENST00000560532	UBR4	Q5T4S7	5183 aa		-0.04	□□□□□ -2.42
SLTM-223	ENST00000560532	MT1F	P04733	61 aa		-0.04	□□□□□ -2.42
SLTM-223	ENST00000560532	FAT1	Q14517	4588 aa		-0.04	□□□□□ -2.42
SLTM-223	ENST00000560532	MYO15A	Q9UKN7	3530 aa		-0.05	□□□□□ -2.42
SLTM-223	ENST00000560532	LOC400499	M0QZD8	3231 aa		-0.05	□□□□□ -2.42
SLTM-223	ENST00000560532	STARD9	Q9P2P6	4700 aa		-0.05	□□□□□ -2.42
SLTM-223	ENST00000560532	DEFB108B	Q8NET1	73 aa		-0.05	□□□□□ -2.42
SLTM-223	ENST00000560532	SPEG	Q15772	3267 aa		-0.05	□□□□□ -2.42
SLTM-223	ENST00000560532	DYNC1H1	Q14204	4646 aa	Known RBP	-0.05	□□□□□ -2.42
SLTM-223	ENST00000560532	USH2A	O75445	5202 aa		-0.06	□□□□□ -2.42
SLTM-223	ENST00000560532	DCHS1	Q96JQ0	3298 aa		-0.06	□□□□□ -2.42
SLTM-223	ENST00000560532	PLEC	Q15149	4684 aa	Known RBP	-0.06	□□□□□ -2.42
SLTM-223	ENST00000560532	KRTAP20-2	Q3LI61	65 aa		-0.06	□□□□□ -2.42
SLTM-223	ENST00000560532	WDFY3	Q8IZQ1	3526 aa		-0.06	□□□□□ -2.42
SLTM-223	ENST00000560532	HERC1	Q15751	4861 aa		-0.06	□□□□□ -2.42
SLTM-223	ENST00000560532	VCAN	P13611	3396 aa		-0.07	□□□□□ -2.42
SLTM-223	ENST00000560532	USP34	Q70CQ2	3546 aa		-0.07	□□□□□ -2.42
SLTM-223	ENST00000560532	UNC80	Q8N2C7	3258 aa		-0.07	□□□□□ -2.42
SLTM-223	ENST00000560532	EP400	Q96L91	3159 aa		-0.08	□□□□□ -2.42
SLTM-223	ENST00000560532	CFAP47	Q6ZTR5	3102 aa		-0.08	□□□□□ -2.42
SLTM-223	ENST00000560532	EPPK1	P58107	5090 aa	Known RBP	-0.08	□□□□□ -2.42
SLTM-223	ENST00000560532	HTN3	P15516	51 aa		-0.08	□□□□□ -2.42
SLTM-223	ENST00000560532	ASPM	Q8IZT6	3477 aa		-0.08	□□□□□ -2.42
SLTM-223	ENST00000560532	DNHD1	Q96M86	4753 aa		-0.09	□□□□□ -2.42
SLTM-223	ENST00000560532	DNAH5	Q8TE73	4624 aa		-0.1	□□□□□ -2.42
SLTM-223	ENST00000560532	RNF213	Q63HN8	5207 aa		-0.1	□□□□□ -2.43
SLTM-223	ENST00000560532	UTRN	P46939	3433 aa		-0.1	□□□□□ -2.43
SLTM-223	ENST00000560532	STATH	P02808	62 aa		-0.11	□□□□□ -2.43
SLTM-223	ENST00000560532	BRCA2	P51587	3418 aa		-0.11	□□□□□ -2.43
SLTM-223	ENST00000560532	NEB	P20929	6669 aa		-0.12	□□□□□ -2.43
SLTM-223	ENST00000560532	CENPF	P49454	3210 aa		-0.12	□□□□□ -2.43
SLTM-223	ENST00000560532	KRTAP19-2	Q3LHN2	52 aa		-0.12	□□□□□ -2.43
SLTM-223	ENST00000560532	HERC2	O95714	4834 aa		-0.12	□□□□□ -2.43
SLTM-223	ENST00000560532	HYDIN	Q4G0P3	5121 aa		-0.12	□□□□□ -2.43
SLTM-223	ENST00000560532	VPS13A	Q96RL7	3174 aa		-0.12	□□□□□ -2.43
SLTM-223	ENST00000560532	BIRC6	Q9NR09	4857 aa		-0.13	□□□□□ -2.43
SLTM-223	ENST00000560532	GOLGB1	Q14789	3259 aa	Known RBP	-0.13	□□□□□ -2.43
SLTM-223	ENST00000560532	KIAA1109	Q2LD37	5005 aa		-0.14	□□□□□ -2.43
SLTM-223	ENST00000560532	RYR3	Q15413	4870 aa		-0.14	□□□□□ -2.43
SLTM-223	ENST00000560532	DNAH14	Q0VDD8	3507 aa		-0.15	□□□□□ -2.43
SLTM-223	ENST00000560532	KRTAP20-1	Q3LI63	56 aa		-0.15	□□□□□ -2.43
SLTM-223	ENST00000560532	CDH23	Q9H251	3354 aa		-0.16	□□□□□ -2.43
SLTM-223	ENST00000560532	RYR2	Q92736	4967 aa		-0.16	□□□□□ -2.43
SLTM-223	ENST00000560532	KRTAP19-6	Q3LI70	58 aa		-0.18	□□□□□ -2.44
SLTM-223	ENST00000560532	ABCA13	Q86UQ4	5058 aa		-0.19	□□□□□ -2.44

Retrieved 78 of 20,778 RNA–protein pairs in 114 ms