RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, humanhuman

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-223ENST00000560532 AEBP2Q6ZN18 517 aaPredicted RBP30.87■■■□□ 2.53
SLTM-223ENST00000560532 CHIC1Q5VXU3 224 aa29.02■■■□□ 2.24
SLTM-223ENST00000560532 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
SLTM-223ENST00000560532 PHF23Q9BUL5 403 aaPredicted RBP25.97■■□□□ 1.75
SLTM-223ENST00000560532 FOXD1Q16676 465 aa24.61■■□□□ 1.53
SLTM-223ENST00000560532 MSH5O43196 834 aa23.09■■□□□ 1.29
SLTM-223ENST00000560532 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
SLTM-223ENST00000560532 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
SLTM-223ENST00000560532 PIAS4Q8N2W9 510 aaPredicted RBP22.96■■□□□ 1.27
SLTM-223ENST00000560532 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
SLTM-223ENST00000560532 ADRA2BP18089 450 aa22.75■■□□□ 1.23
SLTM-223ENST00000560532 MAPK8IP2Q13387 824 aaPredicted RBP20.99■□□□□ 0.95
SLTM-223ENST00000560532 DMRT2Q9Y5R5 561 aa20.84■□□□□ 0.93
SLTM-223ENST00000560532 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
SLTM-223ENST00000560532 PPP4R3CPQ6ZMV5 832 aa20.21■□□□□ 0.83
SLTM-223ENST00000560532 DCAF8L1A6NGE4 600 aa20.12■□□□□ 0.81
SLTM-223ENST00000560532 CACNB1Q02641 598 aaPredicted RBP20.04■□□□□ 0.8
SLTM-223ENST00000560532 HOXD11P31277 338 aaPredicted RBP19.94■□□□□ 0.78
SLTM-223ENST00000560532 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
SLTM-223ENST00000560532 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
SLTM-223ENST00000560532 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
SLTM-223ENST00000560532 C1QBPQ07021 282 aaKnown RBP19.36■□□□□ 0.69
SLTM-223ENST00000560532 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
SLTM-223ENST00000560532 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
SLTM-223ENST00000560532 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.641e-6■□□□□ 8.5
SLTM-223ENST00000560532 NPM3O75607 178 aaKnown RBP19.07■□□□□ 0.64
SLTM-223ENST00000560532 U3KPZ7 1027 aaPredicted RBP18.63■□□□□ 0.57
SLTM-223ENST00000560532 KCNA4P22459 653 aa18.49■□□□□ 0.55
SLTM-223ENST00000560532 CAPN15O75808 1086 aa18.47■□□□□ 0.55
SLTM-223ENST00000560532 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
SLTM-223ENST00000560532 DSG3P32926 999 aa18.37■□□□□ 0.53
SLTM-223ENST00000560532 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
SLTM-223ENST00000560532 TRHP20396 242 aaPredicted RBP18.12■□□□□ 0.49
SLTM-223ENST00000560532 ABCB7O75027 752 aa18.04■□□□□ 0.48
SLTM-223ENST00000560532 APLP2Q06481 763 aa18.03■□□□□ 0.48
SLTM-223ENST00000560532 POTEHQ6S545 545 aa18.01■□□□□ 0.47
SLTM-223ENST00000560532 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
SLTM-223ENST00000560532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
SLTM-223ENST00000560532 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
SLTM-223ENST00000560532 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
SLTM-223ENST00000560532 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
SLTM-223ENST00000560532 POLA2Q14181 598 aa17.52■□□□□ 0.4
SLTM-223ENST00000560532 RBM42Q9BTD8 480 aaKnown RBP17.51■□□□□ 0.39
SLTM-223ENST00000560532 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
SLTM-223ENST00000560532 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
SLTM-223ENST00000560532 ATF5Q9Y2D1 282 aaPredicted RBP17.29■□□□□ 0.36
SLTM-223ENST00000560532 CHRDL2Q6WN34 429 aa17.26■□□□□ 0.35
SLTM-223ENST00000560532 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
SLTM-223ENST00000560532 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
SLTM-223ENST00000560532 OSCARQ8IYS5 282 aa17.02■□□□□ 0.32
SLTM-223ENST00000560532 ZBTB22O15209 634 aa17■□□□□ 0.31
SLTM-223ENST00000560532 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
SLTM-223ENST00000560532 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
SLTM-223ENST00000560532 PITPNM1O00562 1244 aa16.77■□□□□ 0.28
SLTM-223ENST00000560532 SP7Q8TDD2 431 aaPredicted RBP16.75■□□□□ 0.27
SLTM-223ENST00000560532 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
SLTM-223ENST00000560532 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
SLTM-223ENST00000560532 HAX1O00165 279 aa16.6■□□□□ 0.25
SLTM-223ENST00000560532 FBLN2P98095 1184 aa16.6■□□□□ 0.25
SLTM-223ENST00000560532 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
SLTM-223ENST00000560532 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
SLTM-223ENST00000560532 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
SLTM-223ENST00000560532 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
SLTM-223ENST00000560532 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
SLTM-223ENST00000560532 EVX2Q03828 476 aa16.36■□□□□ 0.21
SLTM-223ENST00000560532 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
SLTM-223ENST00000560532 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
SLTM-223ENST00000560532 PRKAR2AP13861 404 aaKnown RBP16.34■□□□□ 0.21
SLTM-223ENST00000560532 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
SLTM-223ENST00000560532 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
SLTM-223ENST00000560532 PABPN1Q86U42 306 aaKnown RBP eCLIP16.12■□□□□ 0.17
SLTM-223ENST00000560532 C19orf67A6NJJ6 358 aa16.11■□□□□ 0.17
SLTM-223ENST00000560532 PRR29P0C7W0 189 aa16.06■□□□□ 0.16
SLTM-223ENST00000560532 GABBR2O75899 941 aa15.96■□□□□ 0.15
SLTM-223ENST00000560532 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
SLTM-223ENST00000560532 CD44P16070 742 aaKnown RBP15.81■□□□□ 0.12
SLTM-223ENST00000560532 FARP1Q9Y4F1 1045 aaPredicted RBP15.8■□□□□ 0.12
SLTM-223ENST00000560532 LHX8Q68G74 356 aa15.71■□□□□ 0.11
SLTM-223ENST00000560532 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
SLTM-223ENST00000560532 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
SLTM-223ENST00000560532 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
SLTM-223ENST00000560532 STAG3Q9UJ98 1225 aa15.56■□□□□ 0.08
SLTM-223ENST00000560532 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
SLTM-223ENST00000560532 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
SLTM-223ENST00000560532 CLCN6P51797 869 aa15.51■□□□□ 0.07
SLTM-223ENST00000560532 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
SLTM-223ENST00000560532 DCBLD2Q96PD2 775 aa15.5■□□□□ 0.07
SLTM-223ENST00000560532 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
SLTM-223ENST00000560532 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
SLTM-223ENST00000560532 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
SLTM-223ENST00000560532 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
SLTM-223ENST00000560532 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
SLTM-223ENST00000560532 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
SLTM-223ENST00000560532 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
SLTM-223ENST00000560532 OTUD5Q96G74 571 aa15.1■□□□□ 0.01
SLTM-223ENST00000560532 MS4A3Q96HJ5 214 aa15.1■□□□□ 0.01
SLTM-223ENST00000560532 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
SLTM-223ENST00000560532 PROM2Q8N271 834 aa15.06■□□□□ 0
SLTM-223ENST00000560532 PLSCR2Q9NRY7 297 aa15□□□□□ -0.01
SLTM-223ENST00000560532 ASTLQ6HA08 431 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms