RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, humanhuman

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-208ENST00000560328 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
NEO1-208ENST00000560328 UBR4Q5T4S7 5183 aa3.01□□□□□ -1.93
NEO1-208ENST00000560328 LCE2DQ5TA82 110 aaPredicted RBP3.01□□□□□ -1.93
NEO1-208ENST00000560328 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
NEO1-208ENST00000560328 MT1MQ8N339 61 aa2.99□□□□□ -1.93
NEO1-208ENST00000560328 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
NEO1-208ENST00000560328 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
NEO1-208ENST00000560328 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
NEO1-208ENST00000560328 LOC100996750A0A140TA64 210 aa2.93□□□□□ -1.94
NEO1-208ENST00000560328 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
NEO1-208ENST00000560328 MUC2Q02817 5179 aa2.9□□□□□ -1.95
NEO1-208ENST00000560328 MT4P47944 62 aa2.84□□□□□ -1.96
NEO1-208ENST00000560328 MT3P25713 68 aa2.83□□□□□ -1.96
NEO1-208ENST00000560328 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
NEO1-208ENST00000560328 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
NEO1-208ENST00000560328 MT1AP04731 61 aa2.74□□□□□ -1.97
NEO1-208ENST00000560328 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP2-1Q9BYU5 128 aa2.7□□□□□ -1.98
NEO1-208ENST00000560328 PRM1P04553 51 aa2.68□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
NEO1-208ENST00000560328 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
NEO1-208ENST00000560328 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
NEO1-208ENST00000560328 KRTAP9-7A8MTY7 169 aa2.66□□□□□ -1.98
NEO1-208ENST00000560328 LCE1DQ5T752 114 aa2.65□□□□□ -1.98
NEO1-208ENST00000560328 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
NEO1-208ENST00000560328 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
NEO1-208ENST00000560328 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
NEO1-208ENST00000560328 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
NEO1-208ENST00000560328 USH2AO75445 5202 aa2.6□□□□□ -1.99
NEO1-208ENST00000560328 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
NEO1-208ENST00000560328 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
NEO1-208ENST00000560328 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
NEO1-208ENST00000560328 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
NEO1-208ENST00000560328 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
NEO1-208ENST00000560328 KMT2DO14686 5537 aa2.5□□□□□ -2.01
NEO1-208ENST00000560328 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
NEO1-208ENST00000560328 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
NEO1-208ENST00000560328 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
NEO1-208ENST00000560328 SSPOA2VEC9 5147 aa2.38□□□□□ -2.03
NEO1-208ENST00000560328 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
NEO1-208ENST00000560328 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
NEO1-208ENST00000560328 NEBP20929 6669 aa2.28□□□□□ -2.04
NEO1-208ENST00000560328 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
NEO1-208ENST00000560328 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
NEO1-208ENST00000560328 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
NEO1-208ENST00000560328 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
NEO1-208ENST00000560328 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
NEO1-208ENST00000560328 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
NEO1-208ENST00000560328 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
NEO1-208ENST00000560328 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
NEO1-208ENST00000560328 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
NEO1-208ENST00000560328 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
NEO1-208ENST00000560328 KRTAP4-11Q9BYQ6 195 aa1.99□□□□□ -2.09
NEO1-208ENST00000560328 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
NEO1-208ENST00000560328 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
NEO1-208ENST00000560328 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
NEO1-208ENST00000560328 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
NEO1-208ENST00000560328 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
NEO1-208ENST00000560328 KRTAP5-3Q6L8H2 238 aa1.78□□□□□ -2.13
NEO1-208ENST00000560328 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
NEO1-208ENST00000560328 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
NEO1-208ENST00000560328 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
NEO1-208ENST00000560328 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
NEO1-208ENST00000560328 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
NEO1-208ENST00000560328 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
NEO1-208ENST00000560328 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
NEO1-208ENST00000560328 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
NEO1-208ENST00000560328 KRTAP5-1Q6L8H4 278 aa1.47□□□□□ -2.17
NEO1-208ENST00000560328 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
NEO1-208ENST00000560328 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
NEO1-208ENST00000560328 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
NEO1-208ENST00000560328 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
NEO1-208ENST00000560328 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
NEO1-208ENST00000560328 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 40.9 ms