RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 UBR4Q5T4S7 5183 aa3.42□□□□□ -1.86
TMC3-202ENST00000558726 LCE2AQ5TA79 106 aaPredicted RBP3.42□□□□□ -1.86
TMC3-202ENST00000558726 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
TMC3-202ENST00000558726 MUC2Q02817 5179 aa3.38□□□□□ -1.87
TMC3-202ENST00000558726 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
TMC3-202ENST00000558726 SPRR2EP22531 72 aa3.35□□□□□ -1.87
TMC3-202ENST00000558726 SPRR2BP35325 72 aa3.35□□□□□ -1.87
TMC3-202ENST00000558726 SPRR2AP35326 72 aa3.35□□□□□ -1.87
TMC3-202ENST00000558726 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
TMC3-202ENST00000558726 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
TMC3-202ENST00000558726 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
TMC3-202ENST00000558726 SPRR2DP22532 72 aa3.23□□□□□ -1.89
TMC3-202ENST00000558726 MT1AP04731 61 aa3.2□□□□□ -1.9
TMC3-202ENST00000558726 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
TMC3-202ENST00000558726 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
TMC3-202ENST00000558726 PRM1P04553 51 aa3.16□□□□□ -1.9
TMC3-202ENST00000558726 MT3P25713 68 aa3.15□□□□□ -1.91
TMC3-202ENST00000558726 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
TMC3-202ENST00000558726 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
TMC3-202ENST00000558726 USH2AO75445 5202 aa3.03□□□□□ -1.92
TMC3-202ENST00000558726 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
TMC3-202ENST00000558726 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
TMC3-202ENST00000558726 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
TMC3-202ENST00000558726 KMT2DO14686 5537 aa2.93□□□□□ -1.94
TMC3-202ENST00000558726 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.94
TMC3-202ENST00000558726 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
TMC3-202ENST00000558726 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
TMC3-202ENST00000558726 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
TMC3-202ENST00000558726 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
TMC3-202ENST00000558726 MT4P47944 62 aa2.8□□□□□ -1.96
TMC3-202ENST00000558726 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
TMC3-202ENST00000558726 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
TMC3-202ENST00000558726 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
TMC3-202ENST00000558726 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
TMC3-202ENST00000558726 SSPOA2VEC9 5147 aa2.73□□□□□ -1.97
TMC3-202ENST00000558726 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TMC3-202ENST00000558726 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
TMC3-202ENST00000558726 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
TMC3-202ENST00000558726 KRTAP9-6A0A140TA67 174 aa2.69□□□□□ -1.98
TMC3-202ENST00000558726 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
TMC3-202ENST00000558726 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
TMC3-202ENST00000558726 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.59□□□□□ -1.99
TMC3-202ENST00000558726 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -2
TMC3-202ENST00000558726 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
TMC3-202ENST00000558726 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
TMC3-202ENST00000558726 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
TMC3-202ENST00000558726 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
TMC3-202ENST00000558726 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
TMC3-202ENST00000558726 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
TMC3-202ENST00000558726 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
TMC3-202ENST00000558726 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
TMC3-202ENST00000558726 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
TMC3-202ENST00000558726 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
TMC3-202ENST00000558726 NEBP20929 6669 aa2.23□□□□□ -2.05
TMC3-202ENST00000558726 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
TMC3-202ENST00000558726 LCE1FQ5T754 118 aa2.09□□□□□ -2.07
TMC3-202ENST00000558726 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
TMC3-202ENST00000558726 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
TMC3-202ENST00000558726 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
TMC3-202ENST00000558726 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
TMC3-202ENST00000558726 KRTAP5-3Q6L8H2 238 aa1.96□□□□□ -2.1
TMC3-202ENST00000558726 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
TMC3-202ENST00000558726 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
TMC3-202ENST00000558726 KRTAP4-12Q9BQ66 201 aa1.9□□□□□ -2.1
TMC3-202ENST00000558726 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
TMC3-202ENST00000558726 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
TMC3-202ENST00000558726 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
TMC3-202ENST00000558726 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
TMC3-202ENST00000558726 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
TMC3-202ENST00000558726 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
TMC3-202ENST00000558726 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
TMC3-202ENST00000558726 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TMC3-202ENST00000558726 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
TMC3-202ENST00000558726 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
TMC3-202ENST00000558726 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
TMC3-202ENST00000558726 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
TMC3-202ENST00000558726 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 42.5 ms