RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 KRTAP2-4Q9BYR9 128 aa2.52□□□□□ -2.01
CHD8-213ENST00000557364 KRTAP9-7A8MTY7 169 aa2.5□□□□□ -2.01
CHD8-213ENST00000557364 MT1AP04731 61 aa2.5□□□□□ -2.01
CHD8-213ENST00000557364 LRP2P98164 4655 aa2.5□□□□□ -2.01
CHD8-213ENST00000557364 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
CHD8-213ENST00000557364 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
CHD8-213ENST00000557364 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
CHD8-213ENST00000557364 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CHD8-213ENST00000557364 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
CHD8-213ENST00000557364 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
CHD8-213ENST00000557364 KRTAP2-2Q9BYT5 123 aa2.41□□□□□ -2.02
CHD8-213ENST00000557364 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
CHD8-213ENST00000557364 KMT2CQ8NEZ4 4911 aaKnown RBP2.4□□□□□ -2.03
CHD8-213ENST00000557364 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
CHD8-213ENST00000557364 LPAP08519 4548 aa2.39□□□□□ -2.03
CHD8-213ENST00000557364 PRM1P04553 51 aa2.39□□□□□ -2.03
CHD8-213ENST00000557364 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
CHD8-213ENST00000557364 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.37□□□□□ -2.03
CHD8-213ENST00000557364 LOC100996750A0A140TA64 210 aa2.34□□□□□ -2.04
CHD8-213ENST00000557364 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
CHD8-213ENST00000557364 HYDINQ4G0P3 5121 aa2.29□□□□□ -2.04
CHD8-213ENST00000557364 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
CHD8-213ENST00000557364 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
CHD8-213ENST00000557364 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
CHD8-213ENST00000557364 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
CHD8-213ENST00000557364 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
CHD8-213ENST00000557364 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
CHD8-213ENST00000557364 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
CHD8-213ENST00000557364 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
CHD8-213ENST00000557364 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
CHD8-213ENST00000557364 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
CHD8-213ENST00000557364 HMCN2Q8NDA2 5059 aa2.18□□□□□ -2.06
CHD8-213ENST00000557364 KRTAP4-9Q9BYQ8 210 aa2.16□□□□□ -2.06
CHD8-213ENST00000557364 ABCA13Q86UQ4 5058 aa2.16□□□□□ -2.06
CHD8-213ENST00000557364 FAT4Q6V0I7 4981 aa2.15□□□□□ -2.06
CHD8-213ENST00000557364 UBR4Q5T4S7 5183 aa2.14□□□□□ -2.07
CHD8-213ENST00000557364 FSIP2Q5CZC0 6907 aa2.1□□□□□ -2.07
CHD8-213ENST00000557364 KRTAP5-9P26371 169 aa2.09□□□□□ -2.08
CHD8-213ENST00000557364 MUC2Q02817 5179 aa2.07□□□□□ -2.08
CHD8-213ENST00000557364 KRTAP9-6A8MVA2 160 aa2.01□□□□□ -2.09
CHD8-213ENST00000557364 NEBP20929 6669 aa1.99□□□□□ -2.09
CHD8-213ENST00000557364 OBSCNQ5VST9 7968 aa1.96□□□□□ -2.1
CHD8-213ENST00000557364 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CHD8-213ENST00000557364 KRTAP5-4Q6L8H1 288 aa1.88□□□□□ -2.11
CHD8-213ENST00000557364 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.11
CHD8-213ENST00000557364 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
CHD8-213ENST00000557364 KRTAP4-6Q9BYQ5 205 aa1.83□□□□□ -2.12
CHD8-213ENST00000557364 SSPOA2VEC9 5147 aa1.81□□□□□ -2.12
CHD8-213ENST00000557364 KRTAP4-11Q9BYQ6 195 aa1.77□□□□□ -2.13
CHD8-213ENST00000557364 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
CHD8-213ENST00000557364 MDN1Q9NU22 5596 aa1.76□□□□□ -2.13
CHD8-213ENST00000557364 USH2AO75445 5202 aa1.72□□□□□ -2.13
CHD8-213ENST00000557364 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
CHD8-213ENST00000557364 KRTAP4-12Q9BQ66 201 aa1.66□□□□□ -2.14
CHD8-213ENST00000557364 KRTAP4-2Q9BYR5 136 aa1.66□□□□□ -2.14
CHD8-213ENST00000557364 KRTAP5-3Q6L8H2 238 aa1.64□□□□□ -2.15
CHD8-213ENST00000557364 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
CHD8-213ENST00000557364 KMT2DO14686 5537 aa1.63□□□□□ -2.15
CHD8-213ENST00000557364 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
CHD8-213ENST00000557364 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
CHD8-213ENST00000557364 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.16
CHD8-213ENST00000557364 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
CHD8-213ENST00000557364 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
CHD8-213ENST00000557364 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
CHD8-213ENST00000557364 KRTAP5-8O75690 187 aa1.4□□□□□ -2.18
CHD8-213ENST00000557364 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
CHD8-213ENST00000557364 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
CHD8-213ENST00000557364 MUC5BQ9HC84 5762 aaPredicted RBP1.37□□□□□ -2.19
CHD8-213ENST00000557364 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
CHD8-213ENST00000557364 KRTAP5-10Q6L8G5 202 aa1.29□□□□□ -2.2
CHD8-213ENST00000557364 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
CHD8-213ENST00000557364 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
CHD8-213ENST00000557364 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.16□□□□□ -2.22
CHD8-213ENST00000557364 KRTAP5-1Q6L8H4 278 aa1.16□□□□□ -2.22
CHD8-213ENST00000557364 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
CHD8-213ENST00000557364 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CHD8-213ENST00000557364 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 7.1 ms