RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
GTF2A1-204ENST00000556268 MT1GP13640 62 aa3.26□□□□□ -1.89
GTF2A1-204ENST00000556268 CYSTM1Q9H1C7 97 aa3.25□□□□□ -1.89
GTF2A1-204ENST00000556268 ACYP2P14621 99 aa3.24□□□□□ -1.89
GTF2A1-204ENST00000556268 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
GTF2A1-204ENST00000556268 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
GTF2A1-204ENST00000556268 MT4P47944 62 aa3.23□□□□□ -1.89
GTF2A1-204ENST00000556268 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
GTF2A1-204ENST00000556268 SPTSSBQ8NFR3 76 aa3.21□□□□□ -1.9
GTF2A1-204ENST00000556268 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
GTF2A1-204ENST00000556268 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
GTF2A1-204ENST00000556268 MT1MQ8N339 61 aa3.18□□□□□ -1.9
GTF2A1-204ENST00000556268 A0A0D9SG42 100 aa3.16□□□□□ -1.9
GTF2A1-204ENST00000556268 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
GTF2A1-204ENST00000556268 MT1LQ93083 61 aa3.15□□□□□ -1.91
GTF2A1-204ENST00000556268 SCGB1A1P11684 91 aa3.14□□□□□ -1.91
GTF2A1-204ENST00000556268 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
GTF2A1-204ENST00000556268 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
GTF2A1-204ENST00000556268 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
GTF2A1-204ENST00000556268 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
GTF2A1-204ENST00000556268 SMIM20Q8N5G0 67 aa3.03□□□□□ -1.92
GTF2A1-204ENST00000556268 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
GTF2A1-204ENST00000556268 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
GTF2A1-204ENST00000556268 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
GTF2A1-204ENST00000556268 SPATA8Q6RVD6 105 aa3□□□□□ -1.93
GTF2A1-204ENST00000556268 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
GTF2A1-204ENST00000556268 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
GTF2A1-204ENST00000556268 J3QR89 54 aa2.99□□□□□ -1.93
GTF2A1-204ENST00000556268 SNURFQ9Y675 71 aa2.99□□□□□ -1.93
GTF2A1-204ENST00000556268 A0A1B0GU33 70 aa2.96□□□□□ -1.94
GTF2A1-204ENST00000556268 A0A1B0GV90 55 aa2.95□□□□□ -1.94
GTF2A1-204ENST00000556268 SERP1Q9Y6X1 66 aa2.95□□□□□ -1.94
GTF2A1-204ENST00000556268 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
GTF2A1-204ENST00000556268 SEC61GP60059 68 aa2.94□□□□□ -1.94
GTF2A1-204ENST00000556268 COA5Q86WW8 74 aa2.92□□□□□ -1.94
GTF2A1-204ENST00000556268 TNP1P09430 55 aa2.91□□□□□ -1.94
GTF2A1-204ENST00000556268 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
GTF2A1-204ENST00000556268 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
GTF2A1-204ENST00000556268 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
GTF2A1-204ENST00000556268 SERP2Q8N6R1 65 aa2.85□□□□□ -1.95
GTF2A1-204ENST00000556268 K7ERU9 68 aa2.77□□□□□ -1.97
GTF2A1-204ENST00000556268 A0A1B0GU69 56 aa2.76□□□□□ -1.97
GTF2A1-204ENST00000556268 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
GTF2A1-204ENST00000556268 H7BZZ5 65 aa2.72□□□□□ -1.97
GTF2A1-204ENST00000556268 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
GTF2A1-204ENST00000556268 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
GTF2A1-204ENST00000556268 COX7CP15954 63 aa2.69□□□□□ -1.98
GTF2A1-204ENST00000556268 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
GTF2A1-204ENST00000556268 MT1AP04731 61 aa2.66□□□□□ -1.98
GTF2A1-204ENST00000556268 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
GTF2A1-204ENST00000556268 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
GTF2A1-204ENST00000556268 PRR15LQ9BU68 103 aa2.6□□□□□ -1.99
GTF2A1-204ENST00000556268 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
GTF2A1-204ENST00000556268 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
GTF2A1-204ENST00000556268 UQCR11O14957 56 aa2.53□□□□□ -2
GTF2A1-204ENST00000556268 ATP5EP56381 51 aaPredicted RBP2.44□□□□□ -2.02
GTF2A1-204ENST00000556268 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
GTF2A1-204ENST00000556268 K7ERS5 55 aa2.42□□□□□ -2.02
GTF2A1-204ENST00000556268 CCDC179H3BU77 68 aa2.41□□□□□ -2.02
GTF2A1-204ENST00000556268 ANAPC13Q9BS18 74 aa2.41□□□□□ -2.02
GTF2A1-204ENST00000556268 RPS28P62857 69 aaKnown RBP2.32□□□□□ -2.04
GTF2A1-204ENST00000556268 TMEM258P61165 79 aa2.31□□□□□ -2.04
GTF2A1-204ENST00000556268 Q1T7F1 81 aa2.31□□□□□ -2.04
GTF2A1-204ENST00000556268 CDC42SE1Q9NRR8 79 aa2.26□□□□□ -2.05
GTF2A1-204ENST00000556268 PSPHP1O15172 72 aa2.25□□□□□ -2.05
GTF2A1-204ENST00000556268 ROMO1P60602 79 aa2.24□□□□□ -2.05
GTF2A1-204ENST00000556268 V9GYY9 64 aa2.23□□□□□ -2.05
GTF2A1-204ENST00000556268 PRO0628Q9UI54 55 aa2.19□□□□□ -2.06
GTF2A1-204ENST00000556268 A6NED7 52 aa2.14□□□□□ -2.07
GTF2A1-204ENST00000556268 BRK1Q8WUW1 75 aa2.08□□□□□ -2.08
GTF2A1-204ENST00000556268 PMAIP1Q13794 54 aa2.03□□□□□ -2.08
GTF2A1-204ENST00000556268 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
GTF2A1-204ENST00000556268 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
GTF2A1-204ENST00000556268 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
GTF2A1-204ENST00000556268 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
GTF2A1-204ENST00000556268 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
GTF2A1-204ENST00000556268 INE1O15225 51 aa1.34□□□□□ -2.19
GTF2A1-204ENST00000556268 PRM1P04553 51 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 141.3 ms