RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 KRTAP4-8A0A0G2JLE6 195 aa2.65□□□□□ -1.99
LINC00641-201ENST00000555379 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.99
LINC00641-201ENST00000555379 PRM1P04553 51 aa2.65□□□□□ -1.99
LINC00641-201ENST00000555379 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.99
LINC00641-201ENST00000555379 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
LINC00641-201ENST00000555379 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
LINC00641-201ENST00000555379 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
LINC00641-201ENST00000555379 MT1AP04731 61 aa2.62□□□□□ -1.99
LINC00641-201ENST00000555379 KRTAP9-7A8MTY7 169 aa2.56□□□□□ -2
LINC00641-201ENST00000555379 TNXBP22105 4242 aa2.56□□□□□ -2
LINC00641-201ENST00000555379 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
LINC00641-201ENST00000555379 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
LINC00641-201ENST00000555379 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
LINC00641-201ENST00000555379 EPPK1P58107 5090 aaKnown RBP2.5□□□□□ -2.01
LINC00641-201ENST00000555379 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
LINC00641-201ENST00000555379 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
LINC00641-201ENST00000555379 MT4P47944 62 aa2.48□□□□□ -2.01
LINC00641-201ENST00000555379 ABCA13Q86UQ4 5058 aa2.47□□□□□ -2.01
LINC00641-201ENST00000555379 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.47□□□□□ -2.01
LINC00641-201ENST00000555379 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
LINC00641-201ENST00000555379 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
LINC00641-201ENST00000555379 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
LINC00641-201ENST00000555379 RNF213Q63HN8 5207 aa2.36□□□□□ -2.03
LINC00641-201ENST00000555379 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
LINC00641-201ENST00000555379 LPAP08519 4548 aa2.35□□□□□ -2.03
LINC00641-201ENST00000555379 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
LINC00641-201ENST00000555379 LCE1EQ5T753 118 aa2.3□□□□□ -2.04
LINC00641-201ENST00000555379 KRTAP5-9P26371 169 aa2.28□□□□□ -2.04
LINC00641-201ENST00000555379 FAT4Q6V0I7 4981 aa2.26□□□□□ -2.05
LINC00641-201ENST00000555379 KRTAP4-3Q9BYR4 195 aa2.24□□□□□ -2.05
LINC00641-201ENST00000555379 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
LINC00641-201ENST00000555379 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
LINC00641-201ENST00000555379 UBR4Q5T4S7 5183 aa2.21□□□□□ -2.06
LINC00641-201ENST00000555379 KRTAP6-1Q3LI64 71 aa2.2□□□□□ -2.06
LINC00641-201ENST00000555379 MUC2Q02817 5179 aa2.2□□□□□ -2.06
LINC00641-201ENST00000555379 KRTAP4-9Q9BYQ8 210 aa2.08□□□□□ -2.08
LINC00641-201ENST00000555379 SYNE2Q8WXH0 6885 aaKnown RBP2.07□□□□□ -2.08
LINC00641-201ENST00000555379 NEBP20929 6669 aa2.06□□□□□ -2.08
LINC00641-201ENST00000555379 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
LINC00641-201ENST00000555379 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
LINC00641-201ENST00000555379 KRTAP9-6A8MVA2 160 aa2.02□□□□□ -2.09
LINC00641-201ENST00000555379 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
LINC00641-201ENST00000555379 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
LINC00641-201ENST00000555379 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
LINC00641-201ENST00000555379 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
LINC00641-201ENST00000555379 SYNE1Q8NF91 8797 aaKnown RBP1.94□□□□□ -2.1
LINC00641-201ENST00000555379 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
LINC00641-201ENST00000555379 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
LINC00641-201ENST00000555379 USH2AO75445 5202 aa1.92□□□□□ -2.1
LINC00641-201ENST00000555379 KRTAP4-11Q9BYQ6 195 aa1.85□□□□□ -2.11
LINC00641-201ENST00000555379 KMT2DO14686 5537 aa1.83□□□□□ -2.12
LINC00641-201ENST00000555379 KRTAP4-6Q9BYQ5 205 aa1.81□□□□□ -2.12
LINC00641-201ENST00000555379 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.12
LINC00641-201ENST00000555379 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.13
LINC00641-201ENST00000555379 KRTAP5-3Q6L8H2 238 aa1.77□□□□□ -2.13
LINC00641-201ENST00000555379 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
LINC00641-201ENST00000555379 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
LINC00641-201ENST00000555379 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
LINC00641-201ENST00000555379 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
LINC00641-201ENST00000555379 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
LINC00641-201ENST00000555379 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
LINC00641-201ENST00000555379 MACF1Q9UPN3 7388 aaKnown RBP1.6□□□□□ -2.15
LINC00641-201ENST00000555379 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.15
LINC00641-201ENST00000555379 KRTAP5-2Q701N4 177 aa1.57□□□□□ -2.16
LINC00641-201ENST00000555379 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
LINC00641-201ENST00000555379 KRTAP4-2Q9BYR5 136 aa1.47□□□□□ -2.17
LINC00641-201ENST00000555379 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
LINC00641-201ENST00000555379 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
LINC00641-201ENST00000555379 KRTAP5-7Q6L8G8 165 aa1.35□□□□□ -2.19
LINC00641-201ENST00000555379 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
LINC00641-201ENST00000555379 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
LINC00641-201ENST00000555379 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
LINC00641-201ENST00000555379 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
LINC00641-201ENST00000555379 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
LINC00641-201ENST00000555379 KRTAP5-1Q6L8H4 278 aa1.31□□□□□ -2.2
LINC00641-201ENST00000555379 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
LINC00641-201ENST00000555379 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
LINC00641-201ENST00000555379 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 253.6 ms