RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
LINC00641-201ENST00000555379 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
LINC00641-201ENST00000555379 MYT1Q01538 1121 aa14□□□□□ -0.17
LINC00641-201ENST00000555379 PELP1Q8IZL8 1130 aaKnown RBP13.77□□□□□ -0.21
LINC00641-201ENST00000555379 FAM9AQ8IZU1 332 aaPredicted RBP13.75□□□□□ -0.21
LINC00641-201ENST00000555379 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
LINC00641-201ENST00000555379 APLP2Q06481 763 aa13.31□□□□□ -0.28
LINC00641-201ENST00000555379 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
LINC00641-201ENST00000555379 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.33
LINC00641-201ENST00000555379 TRIM41Q8WV44 630 aa12.79□□□□□ -0.36
LINC00641-201ENST00000555379 ERICH6Q7L0X2 663 aa12.74□□□□□ -0.37
LINC00641-201ENST00000555379 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
LINC00641-201ENST00000555379 CCDC180Q9P1Z9 1646 aa12.67□□□□□ -0.38
LINC00641-201ENST00000555379 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
LINC00641-201ENST00000555379 CCER1Q8TC90 406 aaPredicted RBP12.59□□□□□ -0.39
LINC00641-201ENST00000555379 ABCC9O60706 1549 aa12.59□□□□□ -0.39
LINC00641-201ENST00000555379 CENPBP07199 599 aaPredicted RBP12.53□□□□□ -0.4
LINC00641-201ENST00000555379 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
LINC00641-201ENST00000555379 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
LINC00641-201ENST00000555379 YTHDC1Q96MU7 727 aaKnown RBP12.4□□□□□ -0.42
LINC00641-201ENST00000555379 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
LINC00641-201ENST00000555379 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
LINC00641-201ENST00000555379 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
LINC00641-201ENST00000555379 MYT1LQ9UL68 1186 aa12.3□□□□□ -0.44
LINC00641-201ENST00000555379 NACADO15069 1562 aa12.28□□□□□ -0.44
LINC00641-201ENST00000555379 ZCCHC6Q5VYS8 1495 aaKnown RBP12.25□□□□□ -0.45
LINC00641-201ENST00000555379 RANGAP1P46060 587 aaPredicted RBP12.24□□□□□ -0.45
LINC00641-201ENST00000555379 PABPN1Q86U42 306 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00641-201ENST00000555379 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
LINC00641-201ENST00000555379 NEFLP07196 543 aa12.15□□□□□ -0.46
LINC00641-201ENST00000555379 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
LINC00641-201ENST00000555379 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
LINC00641-201ENST00000555379 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
LINC00641-201ENST00000555379 TRIM26Q12899 539 aaPredicted RBP12.12□□□□□ -0.47
LINC00641-201ENST00000555379 DCAF1Q9Y4B6 1507 aa12.09□□□□□ -0.47
LINC00641-201ENST00000555379 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC00641-201ENST00000555379 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
LINC00641-201ENST00000555379 GLIPR1L2Q4G1C9 344 aa11.96□□□□□ -0.49
LINC00641-201ENST00000555379 EEA1Q15075 1411 aa11.94□□□□□ -0.5
LINC00641-201ENST00000555379 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
LINC00641-201ENST00000555379 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
LINC00641-201ENST00000555379 FBLN2P98095 1184 aa11.9□□□□□ -0.5
LINC00641-201ENST00000555379 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
LINC00641-201ENST00000555379 FAM50AQ14320 339 aaKnown RBP11.84□□□□□ -0.51
LINC00641-201ENST00000555379 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
LINC00641-201ENST00000555379 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
LINC00641-201ENST00000555379 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
LINC00641-201ENST00000555379 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
LINC00641-201ENST00000555379 ITGAEP38570 1179 aa11.81□□□□□ -0.52
LINC00641-201ENST00000555379 NEFMP07197 916 aa11.8□□□□□ -0.52
LINC00641-201ENST00000555379 HRCP23327 699 aa11.78□□□□□ -0.52
LINC00641-201ENST00000555379 DAXXQ9UER7 740 aaPredicted RBP11.77□□□□□ -0.53
LINC00641-201ENST00000555379 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
LINC00641-201ENST00000555379 SMARCA2P51531 1590 aa11.73□□□□□ -0.53
LINC00641-201ENST00000555379 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
LINC00641-201ENST00000555379 SLC4A1APQ9BWU0 796 aaKnown RBP11.71□□□□□ -0.53
LINC00641-201ENST00000555379 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
LINC00641-201ENST00000555379 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
LINC00641-201ENST00000555379 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
LINC00641-201ENST00000555379 KIF27Q86VH2 1401 aa11.67□□□□□ -0.54
LINC00641-201ENST00000555379 ZBTB47Q9UFB7 747 aaPredicted RBP11.66□□□□□ -0.54
LINC00641-201ENST00000555379 PDS5BQ9NTI5 1447 aa11.65□□□□□ -0.55
LINC00641-201ENST00000555379 TSPY4P0CV99 314 aa11.64□□□□□ -0.55
LINC00641-201ENST00000555379 TSPY10P0CW01 314 aa11.64□□□□□ -0.55
LINC00641-201ENST00000555379 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
LINC00641-201ENST00000555379 BCANQ96GW7 911 aa11.62□□□□□ -0.55
LINC00641-201ENST00000555379 GOLGA3Q08378 1498 aa11.6□□□□□ -0.55
LINC00641-201ENST00000555379 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
LINC00641-201ENST00000555379 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
LINC00641-201ENST00000555379 ANP32CO43423 234 aa11.58□□□□□ -0.56
LINC00641-201ENST00000555379 PLEKHD1A6NEE1 506 aa11.57□□□□□ -0.56
LINC00641-201ENST00000555379 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
LINC00641-201ENST00000555379 EIF5BO60841 1220 aaKnown RBP11.56□□□□□ -0.56
LINC00641-201ENST00000555379 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
LINC00641-201ENST00000555379 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
LINC00641-201ENST00000555379 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
LINC00641-201ENST00000555379 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
LINC00641-201ENST00000555379 CLSPNQ9HAW4 1339 aa11.52□□□□□ -0.57
LINC00641-201ENST00000555379 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
LINC00641-201ENST00000555379 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
LINC00641-201ENST00000555379 CARMIL2Q6F5E8 1435 aa11.5□□□□□ -0.57
LINC00641-201ENST00000555379 CLIP1P30622 1438 aa11.49□□□□□ -0.57
LINC00641-201ENST00000555379 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
LINC00641-201ENST00000555379 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
LINC00641-201ENST00000555379 CDCA8Q53HL2 280 aa11.46□□□□□ -0.58
LINC00641-201ENST00000555379 GTF3C3Q9Y5Q9 886 aa11.45□□□□□ -0.58
LINC00641-201ENST00000555379 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
LINC00641-201ENST00000555379 NEUROD1Q13562 356 aa11.44□□□□□ -0.58
LINC00641-201ENST00000555379 ZNF326Q5BKZ1 582 aaKnown RBP11.43□□□□□ -0.58
LINC00641-201ENST00000555379 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
LINC00641-201ENST00000555379 TNIKQ9UKE5 1360 aa11.41□□□□□ -0.58
LINC00641-201ENST00000555379 CEP162Q5TB80 1403 aa11.41□□□□□ -0.58
LINC00641-201ENST00000555379 KANK1Q14678 1352 aa11.4□□□□□ -0.58
LINC00641-201ENST00000555379 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.59
LINC00641-201ENST00000555379 TOP2AP11388 1531 aaKnown RBP11.38□□□□□ -0.59
LINC00641-201ENST00000555379 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
LINC00641-201ENST00000555379 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
LINC00641-201ENST00000555379 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
LINC00641-201ENST00000555379 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
LINC00641-201ENST00000555379 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms