RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
CCNK-203ENST00000553865 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
CCNK-203ENST00000553865 MT1LQ93083 61 aa2.99□□□□□ -1.93
CCNK-203ENST00000553865 MT1EP04732 61 aa2.98□□□□□ -1.93
CCNK-203ENST00000553865 FAT4Q6V0I7 4981 aa2.97□□□□□ -1.93
CCNK-203ENST00000553865 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
CCNK-203ENST00000553865 MUC2Q02817 5179 aa2.94□□□□□ -1.94
CCNK-203ENST00000553865 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
CCNK-203ENST00000553865 MT3P25713 68 aa2.91□□□□□ -1.94
CCNK-203ENST00000553865 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.94
CCNK-203ENST00000553865 PRM1P04553 51 aa2.9□□□□□ -1.95
CCNK-203ENST00000553865 MT1MQ8N339 61 aa2.85□□□□□ -1.95
CCNK-203ENST00000553865 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
CCNK-203ENST00000553865 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
CCNK-203ENST00000553865 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.8□□□□□ -1.96
CCNK-203ENST00000553865 KRTAP6-3Q3LI67 103 aa2.79□□□□□ -1.96
CCNK-203ENST00000553865 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
CCNK-203ENST00000553865 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
CCNK-203ENST00000553865 LOC100996750A0A140TA64 210 aa2.74□□□□□ -1.97
CCNK-203ENST00000553865 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CCNK-203ENST00000553865 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
CCNK-203ENST00000553865 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
CCNK-203ENST00000553865 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
CCNK-203ENST00000553865 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
CCNK-203ENST00000553865 MT4P47944 62 aa2.68□□□□□ -1.98
CCNK-203ENST00000553865 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
CCNK-203ENST00000553865 MT1AP04731 61 aa2.67□□□□□ -1.98
CCNK-203ENST00000553865 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
CCNK-203ENST00000553865 KRTAP5-9P26371 169 aa2.58□□□□□ -2
CCNK-203ENST00000553865 KRTAP9-6A8MVA2 160 aa2.57□□□□□ -2
CCNK-203ENST00000553865 LCE4AQ5TA78 99 aa2.57□□□□□ -2
CCNK-203ENST00000553865 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
CCNK-203ENST00000553865 KMT2DO14686 5537 aa2.53□□□□□ -2.01
CCNK-203ENST00000553865 USH2AO75445 5202 aa2.52□□□□□ -2.01
CCNK-203ENST00000553865 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
CCNK-203ENST00000553865 KRTAP4-9Q9BYQ8 210 aa2.51□□□□□ -2.01
CCNK-203ENST00000553865 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
CCNK-203ENST00000553865 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
CCNK-203ENST00000553865 KRTAP9-4Q9BYQ2 154 aa2.47□□□□□ -2.01
CCNK-203ENST00000553865 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CCNK-203ENST00000553865 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
CCNK-203ENST00000553865 NEBP20929 6669 aa2.43□□□□□ -2.02
CCNK-203ENST00000553865 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
CCNK-203ENST00000553865 SSPOA2VEC9 5147 aa2.4□□□□□ -2.02
CCNK-203ENST00000553865 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CCNK-203ENST00000553865 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
CCNK-203ENST00000553865 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CCNK-203ENST00000553865 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
CCNK-203ENST00000553865 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
CCNK-203ENST00000553865 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
CCNK-203ENST00000553865 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
CCNK-203ENST00000553865 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
CCNK-203ENST00000553865 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
CCNK-203ENST00000553865 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
CCNK-203ENST00000553865 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
CCNK-203ENST00000553865 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.08
CCNK-203ENST00000553865 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CCNK-203ENST00000553865 KRTAP4-6Q9BYQ5 205 aa2.05□□□□□ -2.08
CCNK-203ENST00000553865 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
CCNK-203ENST00000553865 KRTAP5-3Q6L8H2 238 aa1.87□□□□□ -2.11
CCNK-203ENST00000553865 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
CCNK-203ENST00000553865 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
CCNK-203ENST00000553865 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
CCNK-203ENST00000553865 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CCNK-203ENST00000553865 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
CCNK-203ENST00000553865 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
CCNK-203ENST00000553865 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
CCNK-203ENST00000553865 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
CCNK-203ENST00000553865 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
CCNK-203ENST00000553865 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
CCNK-203ENST00000553865 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
CCNK-203ENST00000553865 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
CCNK-203ENST00000553865 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CCNK-203ENST00000553865 MUC5BQ9HC84 5762 aaPredicted RBP1.49□□□□□ -2.17
CCNK-203ENST00000553865 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
CCNK-203ENST00000553865 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CCNK-203ENST00000553865 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CCNK-203ENST00000553865 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 94 ms