RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 HERC2O95714 4834 aa3.06□□□□□ -1.92
TRERF1-205ENST00000541110 MT1EP04732 61 aa3.05□□□□□ -1.92
TRERF1-205ENST00000541110 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
TRERF1-205ENST00000541110 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
TRERF1-205ENST00000541110 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
TRERF1-205ENST00000541110 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
TRERF1-205ENST00000541110 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
TRERF1-205ENST00000541110 MT1MQ8N339 61 aa3.01□□□□□ -1.93
TRERF1-205ENST00000541110 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
TRERF1-205ENST00000541110 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
TRERF1-205ENST00000541110 ABCA13Q86UQ4 5058 aa2.93□□□□□ -1.94
TRERF1-205ENST00000541110 KRTAP19-2Q3LHN2 52 aa2.9□□□□□ -1.95
TRERF1-205ENST00000541110 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
TRERF1-205ENST00000541110 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
TRERF1-205ENST00000541110 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
TRERF1-205ENST00000541110 MUC17Q685J3 4493 aa2.86□□□□□ -1.95
TRERF1-205ENST00000541110 HERC1Q15751 4861 aa2.85□□□□□ -1.95
TRERF1-205ENST00000541110 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
TRERF1-205ENST00000541110 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
TRERF1-205ENST00000541110 MUC2Q02817 5179 aa2.82□□□□□ -1.96
TRERF1-205ENST00000541110 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
TRERF1-205ENST00000541110 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
TRERF1-205ENST00000541110 MT1AP04731 61 aa2.76□□□□□ -1.97
TRERF1-205ENST00000541110 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
TRERF1-205ENST00000541110 LCE2AQ5TA79 106 aaPredicted RBP2.74□□□□□ -1.97
TRERF1-205ENST00000541110 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
TRERF1-205ENST00000541110 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
TRERF1-205ENST00000541110 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
TRERF1-205ENST00000541110 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
TRERF1-205ENST00000541110 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
TRERF1-205ENST00000541110 RNF213Q63HN8 5207 aa2.66□□□□□ -1.98
TRERF1-205ENST00000541110 KRTAP6-3Q3LI67 103 aa2.65□□□□□ -1.98
TRERF1-205ENST00000541110 KRTAP9-4Q9BYQ2 154 aa2.64□□□□□ -1.99
TRERF1-205ENST00000541110 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.63□□□□□ -1.99
TRERF1-205ENST00000541110 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
TRERF1-205ENST00000541110 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
TRERF1-205ENST00000541110 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
TRERF1-205ENST00000541110 USH2AO75445 5202 aa2.52□□□□□ -2.01
TRERF1-205ENST00000541110 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
TRERF1-205ENST00000541110 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
TRERF1-205ENST00000541110 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.01
TRERF1-205ENST00000541110 KMT2DO14686 5537 aa2.39□□□□□ -2.03
TRERF1-205ENST00000541110 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
TRERF1-205ENST00000541110 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
TRERF1-205ENST00000541110 SSPOA2VEC9 5147 aa2.29□□□□□ -2.04
TRERF1-205ENST00000541110 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
TRERF1-205ENST00000541110 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
TRERF1-205ENST00000541110 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
TRERF1-205ENST00000541110 KRTAP4-2Q9BYR5 136 aa2.26□□□□□ -2.05
TRERF1-205ENST00000541110 DSTQ03001 7570 aaKnown RBP2.2□□□□□ -2.06
TRERF1-205ENST00000541110 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
TRERF1-205ENST00000541110 MUC12Q9UKN1 5478 aa2.13□□□□□ -2.07
TRERF1-205ENST00000541110 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
TRERF1-205ENST00000541110 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
TRERF1-205ENST00000541110 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
TRERF1-205ENST00000541110 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
TRERF1-205ENST00000541110 KRTAP5-4Q6L8H1 288 aa1.94□□□□□ -2.1
TRERF1-205ENST00000541110 NEBP20929 6669 aa1.89□□□□□ -2.11
TRERF1-205ENST00000541110 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
TRERF1-205ENST00000541110 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
TRERF1-205ENST00000541110 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
TRERF1-205ENST00000541110 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
TRERF1-205ENST00000541110 KRTAP5-3Q6L8H2 238 aa1.68□□□□□ -2.14
TRERF1-205ENST00000541110 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
TRERF1-205ENST00000541110 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
TRERF1-205ENST00000541110 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
TRERF1-205ENST00000541110 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
TRERF1-205ENST00000541110 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
TRERF1-205ENST00000541110 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
TRERF1-205ENST00000541110 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
TRERF1-205ENST00000541110 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
TRERF1-205ENST00000541110 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.21
TRERF1-205ENST00000541110 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
TRERF1-205ENST00000541110 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
TRERF1-205ENST00000541110 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
TRERF1-205ENST00000541110 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
TRERF1-205ENST00000541110 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 111.4 ms