RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 LCE2DQ5TA82 110 aaPredicted RBP4.01□□□□□ -1.77
CIT-208ENST00000537607 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
CIT-208ENST00000537607 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CIT-208ENST00000537607 MUC2Q02817 5179 aa3.96□□□□□ -1.78
CIT-208ENST00000537607 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
CIT-208ENST00000537607 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
CIT-208ENST00000537607 MT1MQ8N339 61 aa3.91□□□□□ -1.78
CIT-208ENST00000537607 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
CIT-208ENST00000537607 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
CIT-208ENST00000537607 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
CIT-208ENST00000537607 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
CIT-208ENST00000537607 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
CIT-208ENST00000537607 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
CIT-208ENST00000537607 MT4P47944 62 aa3.73□□□□□ -1.81
CIT-208ENST00000537607 MT3P25713 68 aa3.72□□□□□ -1.81
CIT-208ENST00000537607 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
CIT-208ENST00000537607 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
CIT-208ENST00000537607 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
CIT-208ENST00000537607 MT1AP04731 61 aa3.59□□□□□ -1.83
CIT-208ENST00000537607 USH2AO75445 5202 aa3.59□□□□□ -1.84
CIT-208ENST00000537607 PRM1P04553 51 aa3.57□□□□□ -1.84
CIT-208ENST00000537607 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
CIT-208ENST00000537607 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
CIT-208ENST00000537607 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
CIT-208ENST00000537607 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
CIT-208ENST00000537607 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
CIT-208ENST00000537607 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
CIT-208ENST00000537607 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
CIT-208ENST00000537607 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
CIT-208ENST00000537607 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
CIT-208ENST00000537607 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
CIT-208ENST00000537607 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
CIT-208ENST00000537607 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
CIT-208ENST00000537607 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
CIT-208ENST00000537607 KMT2DO14686 5537 aa3.39□□□□□ -1.87
CIT-208ENST00000537607 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
CIT-208ENST00000537607 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
CIT-208ENST00000537607 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
CIT-208ENST00000537607 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
CIT-208ENST00000537607 KRTAP9-4Q9BYQ2 154 aa3.3□□□□□ -1.88
CIT-208ENST00000537607 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
CIT-208ENST00000537607 LCE4AQ5TA78 99 aa3.21□□□□□ -1.89
CIT-208ENST00000537607 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
CIT-208ENST00000537607 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
CIT-208ENST00000537607 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
CIT-208ENST00000537607 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
CIT-208ENST00000537607 NEBP20929 6669 aa3.03□□□□□ -1.92
CIT-208ENST00000537607 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CIT-208ENST00000537607 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
CIT-208ENST00000537607 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
CIT-208ENST00000537607 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
CIT-208ENST00000537607 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
CIT-208ENST00000537607 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
CIT-208ENST00000537607 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
CIT-208ENST00000537607 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
CIT-208ENST00000537607 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
CIT-208ENST00000537607 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
CIT-208ENST00000537607 MUC5ACP98088 5654 aa2.57□□□□□ -2
CIT-208ENST00000537607 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
CIT-208ENST00000537607 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2
CIT-208ENST00000537607 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
CIT-208ENST00000537607 KRTAP4-2Q9BYR5 136 aa2.51□□□□□ -2.01
CIT-208ENST00000537607 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
CIT-208ENST00000537607 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
CIT-208ENST00000537607 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
CIT-208ENST00000537607 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
CIT-208ENST00000537607 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
CIT-208ENST00000537607 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
CIT-208ENST00000537607 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
CIT-208ENST00000537607 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
CIT-208ENST00000537607 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
CIT-208ENST00000537607 KRTAP5-11Q6L8G4 156 aa1.86□□□□□ -2.11
CIT-208ENST00000537607 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
CIT-208ENST00000537607 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
CIT-208ENST00000537607 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
CIT-208ENST00000537607 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CIT-208ENST00000537607 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
CIT-208ENST00000537607 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 121.1 ms