RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
PTPRK-221ENST00000532331 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
PTPRK-221ENST00000532331 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
PTPRK-221ENST00000532331 RNF213Q63HN8 5207 aa3.67□□□□□ -1.82
PTPRK-221ENST00000532331 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.82
PTPRK-221ENST00000532331 MT1MQ8N339 61 aa3.64□□□□□ -1.83
PTPRK-221ENST00000532331 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
PTPRK-221ENST00000532331 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
PTPRK-221ENST00000532331 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
PTPRK-221ENST00000532331 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
PTPRK-221ENST00000532331 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
PTPRK-221ENST00000532331 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
PTPRK-221ENST00000532331 MT3P25713 68 aa3.53□□□□□ -1.84
PTPRK-221ENST00000532331 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
PTPRK-221ENST00000532331 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
PTPRK-221ENST00000532331 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
PTPRK-221ENST00000532331 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
PTPRK-221ENST00000532331 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
PTPRK-221ENST00000532331 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
PTPRK-221ENST00000532331 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
PTPRK-221ENST00000532331 MUC2Q02817 5179 aa3.39□□□□□ -1.87
PTPRK-221ENST00000532331 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
PTPRK-221ENST00000532331 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
PTPRK-221ENST00000532331 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
PTPRK-221ENST00000532331 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
PTPRK-221ENST00000532331 MT1AP04731 61 aa3.35□□□□□ -1.87
PTPRK-221ENST00000532331 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
PTPRK-221ENST00000532331 PRM1P04553 51 aa3.28□□□□□ -1.88
PTPRK-221ENST00000532331 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
PTPRK-221ENST00000532331 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
PTPRK-221ENST00000532331 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
PTPRK-221ENST00000532331 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
PTPRK-221ENST00000532331 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
PTPRK-221ENST00000532331 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
PTPRK-221ENST00000532331 USH2AO75445 5202 aa3.04□□□□□ -1.92
PTPRK-221ENST00000532331 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
PTPRK-221ENST00000532331 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
PTPRK-221ENST00000532331 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
PTPRK-221ENST00000532331 NEBP20929 6669 aa2.98□□□□□ -1.93
PTPRK-221ENST00000532331 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
PTPRK-221ENST00000532331 SSPOA2VEC9 5147 aa2.94□□□□□ -1.94
PTPRK-221ENST00000532331 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
PTPRK-221ENST00000532331 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
PTPRK-221ENST00000532331 LCE1FQ5T754 118 aa2.9□□□□□ -1.95
PTPRK-221ENST00000532331 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
PTPRK-221ENST00000532331 FCGBPQ9Y6R7 5405 aaPredicted RBP2.86□□□□□ -1.95
PTPRK-221ENST00000532331 KMT2DO14686 5537 aa2.81□□□□□ -1.96
PTPRK-221ENST00000532331 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
PTPRK-221ENST00000532331 KRTAP4-6Q9BYQ5 205 aa2.78□□□□□ -1.96
PTPRK-221ENST00000532331 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
PTPRK-221ENST00000532331 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
PTPRK-221ENST00000532331 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
PTPRK-221ENST00000532331 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
PTPRK-221ENST00000532331 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
PTPRK-221ENST00000532331 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
PTPRK-221ENST00000532331 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
PTPRK-221ENST00000532331 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
PTPRK-221ENST00000532331 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
PTPRK-221ENST00000532331 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
PTPRK-221ENST00000532331 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
PTPRK-221ENST00000532331 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PTPRK-221ENST00000532331 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
PTPRK-221ENST00000532331 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
PTPRK-221ENST00000532331 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
PTPRK-221ENST00000532331 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
PTPRK-221ENST00000532331 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
PTPRK-221ENST00000532331 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
PTPRK-221ENST00000532331 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
PTPRK-221ENST00000532331 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
PTPRK-221ENST00000532331 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
PTPRK-221ENST00000532331 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
PTPRK-221ENST00000532331 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
PTPRK-221ENST00000532331 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
PTPRK-221ENST00000532331 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PTPRK-221ENST00000532331 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
PTPRK-221ENST00000532331 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PTPRK-221ENST00000532331 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 102.4 ms