RNA–Protein interactions for RNA: ENST00000522214.1

SREK1-211, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-211ENST00000522214 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
SREK1-211ENST00000522214 HERC1Q15751 4861 aa2.23□□□□□ -2.05
SREK1-211ENST00000522214 EPPK1P58107 5090 aaKnown RBP2.22□□□□□ -2.05
SREK1-211ENST00000522214 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
SREK1-211ENST00000522214 BIRC6Q9NR09 4857 aa2.21□□□□□ -2.06
SREK1-211ENST00000522214 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
SREK1-211ENST00000522214 ABCA13Q86UQ4 5058 aa2.19□□□□□ -2.06
SREK1-211ENST00000522214 HERC2O95714 4834 aa2.19□□□□□ -2.06
SREK1-211ENST00000522214 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
SREK1-211ENST00000522214 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
SREK1-211ENST00000522214 PLAC4Q8WY50 150 aa2.14□□□□□ -2.07
SREK1-211ENST00000522214 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
SREK1-211ENST00000522214 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
SREK1-211ENST00000522214 TNP1P09430 55 aa2.1□□□□□ -2.07
SREK1-211ENST00000522214 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.07
SREK1-211ENST00000522214 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
SREK1-211ENST00000522214 PCLOQ9Y6V0 5065 aa2.05□□□□□ -2.08
SREK1-211ENST00000522214 MT1HP80294 61 aa2.01□□□□□ -2.09
SREK1-211ENST00000522214 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
SREK1-211ENST00000522214 MT2AP02795 61 aa1.99□□□□□ -2.09
SREK1-211ENST00000522214 MT1FP04733 61 aa1.98□□□□□ -2.09
SREK1-211ENST00000522214 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
SREK1-211ENST00000522214 M0R2T5 61 aa1.95□□□□□ -2.1
SREK1-211ENST00000522214 MT1BP07438 61 aa1.95□□□□□ -2.1
SREK1-211ENST00000522214 MUC2Q02817 5179 aa1.95□□□□□ -2.1
SREK1-211ENST00000522214 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
SREK1-211ENST00000522214 MT1XP80297 61 aa1.93□□□□□ -2.1
SREK1-211ENST00000522214 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
SREK1-211ENST00000522214 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SREK1-211ENST00000522214 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
SREK1-211ENST00000522214 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
SREK1-211ENST00000522214 INE1O15225 51 aa1.84□□□□□ -2.11
SREK1-211ENST00000522214 KRTAP19-5Q3LI72 72 aa1.77□□□□□ -2.13
SREK1-211ENST00000522214 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
SREK1-211ENST00000522214 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
SREK1-211ENST00000522214 MT1EP04732 61 aa1.69□□□□□ -2.14
SREK1-211ENST00000522214 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
SREK1-211ENST00000522214 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
SREK1-211ENST00000522214 KRTAP2-1Q9BYU5 128 aa1.69□□□□□ -2.14
SREK1-211ENST00000522214 MT1LQ93083 61 aa1.68□□□□□ -2.14
SREK1-211ENST00000522214 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
SREK1-211ENST00000522214 USH2AO75445 5202 aa1.66□□□□□ -2.14
SREK1-211ENST00000522214 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.15
SREK1-211ENST00000522214 SSPOA2VEC9 5147 aa1.65□□□□□ -2.15
SREK1-211ENST00000522214 KMT2DO14686 5537 aa1.61□□□□□ -2.15
SREK1-211ENST00000522214 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
SREK1-211ENST00000522214 MT1MQ8N339 61 aa1.57□□□□□ -2.16
SREK1-211ENST00000522214 KRTAP19-3Q7Z4W3 81 aa1.56□□□□□ -2.16
SREK1-211ENST00000522214 MT1GP13640 62 aa1.55□□□□□ -2.16
SREK1-211ENST00000522214 MT1AP04731 61 aa1.44□□□□□ -2.18
SREK1-211ENST00000522214 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
SREK1-211ENST00000522214 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
SREK1-211ENST00000522214 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
SREK1-211ENST00000522214 MACF1Q9UPN3 7388 aaKnown RBP1.37□□□□□ -2.19
SREK1-211ENST00000522214 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
SREK1-211ENST00000522214 SPRR2EP22531 72 aa1.32□□□□□ -2.2
SREK1-211ENST00000522214 SPRR2BP35325 72 aa1.32□□□□□ -2.2
SREK1-211ENST00000522214 SPRR2AP35326 72 aa1.32□□□□□ -2.2
SREK1-211ENST00000522214 FSIP2Q5CZC0 6907 aa1.32□□□□□ -2.2
SREK1-211ENST00000522214 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
SREK1-211ENST00000522214 PRM1P04553 51 aa1.29□□□□□ -2.2
SREK1-211ENST00000522214 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.21
SREK1-211ENST00000522214 SPRR2DP22532 72 aa1.27□□□□□ -2.21
SREK1-211ENST00000522214 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
SREK1-211ENST00000522214 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
SREK1-211ENST00000522214 NEBP20929 6669 aa1.16□□□□□ -2.22
SREK1-211ENST00000522214 KRTAP20-2Q3LI61 65 aa1.13□□□□□ -2.23
SREK1-211ENST00000522214 KRTAP20-1Q3LI63 56 aa1.09□□□□□ -2.23
SREK1-211ENST00000522214 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
SREK1-211ENST00000522214 MT4P47944 62 aa1.06□□□□□ -2.24
SREK1-211ENST00000522214 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
SREK1-211ENST00000522214 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
SREK1-211ENST00000522214 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
SREK1-211ENST00000522214 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
SREK1-211ENST00000522214 MUC5BQ9HC84 5762 aaPredicted RBP0.82□□□□□ -2.28
SREK1-211ENST00000522214 GPR98Q8WXG9 6306 aa0.76□□□□□ -2.29
SREK1-211ENST00000522214 PHGR1C9JFL3 82 aa0.73□□□□□ -2.29
SREK1-211ENST00000522214 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms