RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 MT1EP04732 61 aa2.68□□□□□ -1.98
GATB-212ENST00000515564 TNXBP22105 4242 aa2.67□□□□□ -1.98
GATB-212ENST00000515564 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
GATB-212ENST00000515564 MT3P25713 68 aa2.64□□□□□ -1.99
GATB-212ENST00000515564 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
GATB-212ENST00000515564 MT1MQ8N339 61 aa2.63□□□□□ -1.99
GATB-212ENST00000515564 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
GATB-212ENST00000515564 KRTAP9-7A8MTY7 169 aa2.62□□□□□ -1.99
GATB-212ENST00000515564 FLGP20930 4061 aaPredicted RBP2.61□□□□□ -1.99
GATB-212ENST00000515564 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
GATB-212ENST00000515564 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
GATB-212ENST00000515564 LOC100996750A0A140TA64 210 aa2.58□□□□□ -2
GATB-212ENST00000515564 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
GATB-212ENST00000515564 HMCN2Q8NDA2 5059 aa2.54□□□□□ -2
GATB-212ENST00000515564 LCE2AQ5TA79 106 aaPredicted RBP2.53□□□□□ -2
GATB-212ENST00000515564 LCE5AQ5TCM9 118 aa2.53□□□□□ -2
GATB-212ENST00000515564 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
GATB-212ENST00000515564 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
GATB-212ENST00000515564 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
GATB-212ENST00000515564 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.46□□□□□ -2.02
GATB-212ENST00000515564 MUC2Q02817 5179 aa2.45□□□□□ -2.02
GATB-212ENST00000515564 KRTAP4-9Q9BYQ8 210 aa2.45□□□□□ -2.02
GATB-212ENST00000515564 PRM1P04553 51 aa2.45□□□□□ -2.02
GATB-212ENST00000515564 FSIP2Q5CZC0 6907 aa2.44□□□□□ -2.02
GATB-212ENST00000515564 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
GATB-212ENST00000515564 MT1AP04731 61 aa2.42□□□□□ -2.02
GATB-212ENST00000515564 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.02
GATB-212ENST00000515564 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.02
GATB-212ENST00000515564 KRTAP19-7Q3SYF9 63 aa2.4□□□□□ -2.03
GATB-212ENST00000515564 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
GATB-212ENST00000515564 LCE4AQ5TA78 99 aa2.38□□□□□ -2.03
GATB-212ENST00000515564 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
GATB-212ENST00000515564 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
GATB-212ENST00000515564 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
GATB-212ENST00000515564 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
GATB-212ENST00000515564 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
GATB-212ENST00000515564 KRTAP9-6A8MVA2 160 aa2.29□□□□□ -2.04
GATB-212ENST00000515564 KRTAP9-4Q9BYQ2 154 aa2.27□□□□□ -2.05
GATB-212ENST00000515564 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
GATB-212ENST00000515564 USH2AO75445 5202 aa2.26□□□□□ -2.05
GATB-212ENST00000515564 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
GATB-212ENST00000515564 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
GATB-212ENST00000515564 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
GATB-212ENST00000515564 KMT2DO14686 5537 aa2.11□□□□□ -2.07
GATB-212ENST00000515564 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
GATB-212ENST00000515564 SSPOA2VEC9 5147 aa2.06□□□□□ -2.08
GATB-212ENST00000515564 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
GATB-212ENST00000515564 KRTAP4-6Q9BYQ5 205 aa2□□□□□ -2.09
GATB-212ENST00000515564 NEBP20929 6669 aa1.98□□□□□ -2.09
GATB-212ENST00000515564 KRTAP5-9P26371 169 aa1.96□□□□□ -2.1
GATB-212ENST00000515564 MACF1Q9UPN3 7388 aaKnown RBP1.94□□□□□ -2.1
GATB-212ENST00000515564 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
GATB-212ENST00000515564 KRTAP4-12Q9BQ66 201 aa1.86□□□□□ -2.11
GATB-212ENST00000515564 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
GATB-212ENST00000515564 MDN1Q9NU22 5596 aa1.84□□□□□ -2.11
GATB-212ENST00000515564 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
GATB-212ENST00000515564 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
GATB-212ENST00000515564 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
GATB-212ENST00000515564 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
GATB-212ENST00000515564 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
GATB-212ENST00000515564 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
GATB-212ENST00000515564 KRTAP5-3Q6L8H2 238 aa1.62□□□□□ -2.15
GATB-212ENST00000515564 MUC5ACP98088 5654 aa1.53□□□□□ -2.16
GATB-212ENST00000515564 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
GATB-212ENST00000515564 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
GATB-212ENST00000515564 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
GATB-212ENST00000515564 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
GATB-212ENST00000515564 KRTAP5-2Q701N4 177 aa1.37□□□□□ -2.19
GATB-212ENST00000515564 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
GATB-212ENST00000515564 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
GATB-212ENST00000515564 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
GATB-212ENST00000515564 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
GATB-212ENST00000515564 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
GATB-212ENST00000515564 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
GATB-212ENST00000515564 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
GATB-212ENST00000515564 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
GATB-212ENST00000515564 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
GATB-212ENST00000515564 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 132.1 ms