RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.05
SH3D19-210ENST00000514152 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.05
SH3D19-210ENST00000514152 SPRR2EP22531 72 aa2.2□□□□□ -2.06
SH3D19-210ENST00000514152 SPRR2BP35325 72 aa2.2□□□□□ -2.06
SH3D19-210ENST00000514152 SPRR2AP35326 72 aa2.2□□□□□ -2.06
SH3D19-210ENST00000514152 MT1MQ8N339 61 aa2.18□□□□□ -2.06
SH3D19-210ENST00000514152 LOC100996750A0A140TA64 210 aa2.17□□□□□ -2.06
SH3D19-210ENST00000514152 HMCN2Q8NDA2 5059 aa2.16□□□□□ -2.06
SH3D19-210ENST00000514152 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
SH3D19-210ENST00000514152 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
SH3D19-210ENST00000514152 SPRR2DP22532 72 aa2.12□□□□□ -2.07
SH3D19-210ENST00000514152 LCE5AQ5TCM9 118 aa2.12□□□□□ -2.07
SH3D19-210ENST00000514152 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
SH3D19-210ENST00000514152 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.12□□□□□ -2.07
SH3D19-210ENST00000514152 RNF213Q63HN8 5207 aa2.12□□□□□ -2.07
SH3D19-210ENST00000514152 KRTAP9-6A8MVA2 160 aa2.11□□□□□ -2.07
SH3D19-210ENST00000514152 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
SH3D19-210ENST00000514152 MT1AP04731 61 aa2.08□□□□□ -2.08
SH3D19-210ENST00000514152 MUC2Q02817 5179 aa2.08□□□□□ -2.08
SH3D19-210ENST00000514152 KRTAP9-6A0A140TA67 174 aa2.07□□□□□ -2.08
SH3D19-210ENST00000514152 KRTAP9-7A8MTY7 169 aa2.07□□□□□ -2.08
SH3D19-210ENST00000514152 UBR4Q5T4S7 5183 aa2.06□□□□□ -2.08
SH3D19-210ENST00000514152 LCE4AQ5TA78 99 aa2.05□□□□□ -2.08
SH3D19-210ENST00000514152 KRTAP4-9Q9BYQ8 210 aa2.05□□□□□ -2.08
SH3D19-210ENST00000514152 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
SH3D19-210ENST00000514152 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
SH3D19-210ENST00000514152 KRTAP9-2Q9BYQ4 174 aa2□□□□□ -2.09
SH3D19-210ENST00000514152 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
SH3D19-210ENST00000514152 KRTAP4-12Q9BQ66 201 aa1.98□□□□□ -2.09
SH3D19-210ENST00000514152 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
SH3D19-210ENST00000514152 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
SH3D19-210ENST00000514152 KRTAP6-1Q3LI64 71 aa1.94□□□□□ -2.1
SH3D19-210ENST00000514152 LCE1AQ5T7P2 110 aa1.92□□□□□ -2.1
SH3D19-210ENST00000514152 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
SH3D19-210ENST00000514152 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
SH3D19-210ENST00000514152 LCE1DQ5T752 114 aa1.88□□□□□ -2.11
SH3D19-210ENST00000514152 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
SH3D19-210ENST00000514152 SYNE2Q8WXH0 6885 aaKnown RBP1.86□□□□□ -2.11
SH3D19-210ENST00000514152 MT4P47944 62 aa1.85□□□□□ -2.11
SH3D19-210ENST00000514152 KMT2DO14686 5537 aa1.85□□□□□ -2.11
SH3D19-210ENST00000514152 USH2AO75445 5202 aa1.81□□□□□ -2.12
SH3D19-210ENST00000514152 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
SH3D19-210ENST00000514152 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
SH3D19-210ENST00000514152 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
SH3D19-210ENST00000514152 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
SH3D19-210ENST00000514152 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
SH3D19-210ENST00000514152 SSPOA2VEC9 5147 aa1.68□□□□□ -2.14
SH3D19-210ENST00000514152 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
SH3D19-210ENST00000514152 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
SH3D19-210ENST00000514152 KRTAP4-11Q9BYQ6 195 aa1.63□□□□□ -2.15
SH3D19-210ENST00000514152 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
SH3D19-210ENST00000514152 MACF1Q9UPN3 7388 aaKnown RBP1.62□□□□□ -2.15
SH3D19-210ENST00000514152 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
SH3D19-210ENST00000514152 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
SH3D19-210ENST00000514152 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
SH3D19-210ENST00000514152 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
SH3D19-210ENST00000514152 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
SH3D19-210ENST00000514152 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
SH3D19-210ENST00000514152 NEBP20929 6669 aa1.43□□□□□ -2.18
SH3D19-210ENST00000514152 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
SH3D19-210ENST00000514152 MDN1Q9NU22 5596 aa1.37□□□□□ -2.19
SH3D19-210ENST00000514152 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
SH3D19-210ENST00000514152 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.19
SH3D19-210ENST00000514152 KRTAP5-11Q6L8G4 156 aa1.31□□□□□ -2.2
SH3D19-210ENST00000514152 KRTAP5-10Q6L8G5 202 aa1.26□□□□□ -2.21
SH3D19-210ENST00000514152 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
SH3D19-210ENST00000514152 KRTAP5-8O75690 187 aa1.19□□□□□ -2.22
SH3D19-210ENST00000514152 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
SH3D19-210ENST00000514152 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SH3D19-210ENST00000514152 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
SH3D19-210ENST00000514152 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
SH3D19-210ENST00000514152 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
SH3D19-210ENST00000514152 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
SH3D19-210ENST00000514152 MUC5BQ9HC84 5762 aaPredicted RBP0.97□□□□□ -2.25
SH3D19-210ENST00000514152 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
SH3D19-210ENST00000514152 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
SH3D19-210ENST00000514152 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 13.9 ms