RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 SYNE2Q8WXH0 6885 aaKnown RBP4.86□□□□□ -1.63
TRIO-221ENST00000513206 KMT2CQ8NEZ4 4911 aaKnown RBP4.86□□□□□ -1.63
TRIO-221ENST00000513206 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
TRIO-221ENST00000513206 KRTAP2-3P0C7H8 128 aa4.77□□□□□ -1.65
TRIO-221ENST00000513206 KRTAP2-4Q9BYR9 128 aa4.77□□□□□ -1.65
TRIO-221ENST00000513206 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
TRIO-221ENST00000513206 HERC2O95714 4834 aa4.74□□□□□ -1.65
TRIO-221ENST00000513206 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
TRIO-221ENST00000513206 RYR2Q92736 4967 aa4.69□□□□□ -1.66
TRIO-221ENST00000513206 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
TRIO-221ENST00000513206 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
TRIO-221ENST00000513206 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
TRIO-221ENST00000513206 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
TRIO-221ENST00000513206 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
TRIO-221ENST00000513206 LCE1FQ5T754 118 aa4.6□□□□□ -1.67
TRIO-221ENST00000513206 LCE1AQ5T7P2 110 aa4.6□□□□□ -1.67
TRIO-221ENST00000513206 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
TRIO-221ENST00000513206 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
TRIO-221ENST00000513206 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
TRIO-221ENST00000513206 MT1AP04731 61 aa4.54□□□□□ -1.68
TRIO-221ENST00000513206 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
TRIO-221ENST00000513206 HERC1Q15751 4861 aa4.48□□□□□ -1.69
TRIO-221ENST00000513206 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
TRIO-221ENST00000513206 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
TRIO-221ENST00000513206 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
TRIO-221ENST00000513206 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.7
TRIO-221ENST00000513206 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
TRIO-221ENST00000513206 BIRC6Q9NR09 4857 aa4.39□□□□□ -1.71
TRIO-221ENST00000513206 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
TRIO-221ENST00000513206 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
TRIO-221ENST00000513206 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
TRIO-221ENST00000513206 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
TRIO-221ENST00000513206 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
TRIO-221ENST00000513206 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
TRIO-221ENST00000513206 MUC2Q02817 5179 aa4.13□□□□□ -1.75
TRIO-221ENST00000513206 FAT4Q6V0I7 4981 aa4.02□□□□□ -1.77
TRIO-221ENST00000513206 EPPK1P58107 5090 aaKnown RBP3.93□□□□□ -1.78
TRIO-221ENST00000513206 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
TRIO-221ENST00000513206 KMT2DO14686 5537 aa3.88□□□□□ -1.79
TRIO-221ENST00000513206 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
TRIO-221ENST00000513206 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
TRIO-221ENST00000513206 OBSCNQ5VST9 7968 aa3.76□□□□□ -1.81
TRIO-221ENST00000513206 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
TRIO-221ENST00000513206 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
TRIO-221ENST00000513206 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
TRIO-221ENST00000513206 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
TRIO-221ENST00000513206 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
TRIO-221ENST00000513206 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
TRIO-221ENST00000513206 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
TRIO-221ENST00000513206 KRTAP5-5Q701N2 237 aaPredicted RBP3.44□□□□□ -1.86
TRIO-221ENST00000513206 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
TRIO-221ENST00000513206 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
TRIO-221ENST00000513206 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
TRIO-221ENST00000513206 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
TRIO-221ENST00000513206 NEBP20929 6669 aa3.33□□□□□ -1.88
TRIO-221ENST00000513206 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
TRIO-221ENST00000513206 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
TRIO-221ENST00000513206 USH2AO75445 5202 aa3.08□□□□□ -1.92
TRIO-221ENST00000513206 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
TRIO-221ENST00000513206 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
TRIO-221ENST00000513206 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
TRIO-221ENST00000513206 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
TRIO-221ENST00000513206 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
TRIO-221ENST00000513206 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TRIO-221ENST00000513206 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -1.99
TRIO-221ENST00000513206 MUC5ACP98088 5654 aa2.56□□□□□ -2
TRIO-221ENST00000513206 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
TRIO-221ENST00000513206 HMCN1Q96RW7 5635 aa2.3□□□□□ -2.04
TRIO-221ENST00000513206 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
TRIO-221ENST00000513206 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
TRIO-221ENST00000513206 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
TRIO-221ENST00000513206 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
TRIO-221ENST00000513206 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
TRIO-221ENST00000513206 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
TRIO-221ENST00000513206 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
TRIO-221ENST00000513206 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
TRIO-221ENST00000513206 KRTAP5-7Q6L8G8 165 aa1.87□□□□□ -2.11
TRIO-221ENST00000513206 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms