RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.59
ARHGEF28-212ENST00000513042 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
ARHGEF28-212ENST00000513042 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
ARHGEF28-212ENST00000513042 BIRC6Q9NR09 4857 aa5.1□□□□□ -1.59
ARHGEF28-212ENST00000513042 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
ARHGEF28-212ENST00000513042 PCLOQ9Y6V0 5065 aa5.09□□□□□ -1.59
ARHGEF28-212ENST00000513042 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
ARHGEF28-212ENST00000513042 MT1AP04731 61 aa4.94□□□□□ -1.62
ARHGEF28-212ENST00000513042 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
ARHGEF28-212ENST00000513042 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
ARHGEF28-212ENST00000513042 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
ARHGEF28-212ENST00000513042 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
ARHGEF28-212ENST00000513042 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
ARHGEF28-212ENST00000513042 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
ARHGEF28-212ENST00000513042 KRTAP20-1Q3LI63 56 aa4.74□□□□□ -1.65
ARHGEF28-212ENST00000513042 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
ARHGEF28-212ENST00000513042 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
ARHGEF28-212ENST00000513042 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
ARHGEF28-212ENST00000513042 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
ARHGEF28-212ENST00000513042 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
ARHGEF28-212ENST00000513042 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
ARHGEF28-212ENST00000513042 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
ARHGEF28-212ENST00000513042 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
ARHGEF28-212ENST00000513042 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.67
ARHGEF28-212ENST00000513042 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
ARHGEF28-212ENST00000513042 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
ARHGEF28-212ENST00000513042 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
ARHGEF28-212ENST00000513042 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
ARHGEF28-212ENST00000513042 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
ARHGEF28-212ENST00000513042 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
ARHGEF28-212ENST00000513042 RNF213Q63HN8 5207 aa4.51□□□□□ -1.69
ARHGEF28-212ENST00000513042 KRTAP6-3Q3LI67 103 aa4.46□□□□□ -1.7
ARHGEF28-212ENST00000513042 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
ARHGEF28-212ENST00000513042 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
ARHGEF28-212ENST00000513042 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
ARHGEF28-212ENST00000513042 MUC2Q02817 5179 aa4.37□□□□□ -1.71
ARHGEF28-212ENST00000513042 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
ARHGEF28-212ENST00000513042 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
ARHGEF28-212ENST00000513042 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
ARHGEF28-212ENST00000513042 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
ARHGEF28-212ENST00000513042 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
ARHGEF28-212ENST00000513042 KMT2DO14686 5537 aa3.87□□□□□ -1.79
ARHGEF28-212ENST00000513042 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
ARHGEF28-212ENST00000513042 USH2AO75445 5202 aa3.81□□□□□ -1.8
ARHGEF28-212ENST00000513042 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
ARHGEF28-212ENST00000513042 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
ARHGEF28-212ENST00000513042 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
ARHGEF28-212ENST00000513042 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
ARHGEF28-212ENST00000513042 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
ARHGEF28-212ENST00000513042 NEBP20929 6669 aa3.67□□□□□ -1.82
ARHGEF28-212ENST00000513042 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
ARHGEF28-212ENST00000513042 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
ARHGEF28-212ENST00000513042 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
ARHGEF28-212ENST00000513042 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
ARHGEF28-212ENST00000513042 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
ARHGEF28-212ENST00000513042 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
ARHGEF28-212ENST00000513042 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
ARHGEF28-212ENST00000513042 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
ARHGEF28-212ENST00000513042 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
ARHGEF28-212ENST00000513042 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
ARHGEF28-212ENST00000513042 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
ARHGEF28-212ENST00000513042 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
ARHGEF28-212ENST00000513042 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
ARHGEF28-212ENST00000513042 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
ARHGEF28-212ENST00000513042 PHGR1C9JFL3 82 aa2.65□□□□□ -1.98
ARHGEF28-212ENST00000513042 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
ARHGEF28-212ENST00000513042 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
ARHGEF28-212ENST00000513042 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
ARHGEF28-212ENST00000513042 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
ARHGEF28-212ENST00000513042 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
ARHGEF28-212ENST00000513042 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
ARHGEF28-212ENST00000513042 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
ARHGEF28-212ENST00000513042 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
ARHGEF28-212ENST00000513042 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
ARHGEF28-212ENST00000513042 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
ARHGEF28-212ENST00000513042 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
ARHGEF28-212ENST00000513042 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms