RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 RNF213Q63HN8 5207 aa2.44□□□□□ -2.02
HTT-208ENST00000510626 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
HTT-208ENST00000510626 LCE2DQ5TA82 110 aaPredicted RBP2.4□□□□□ -2.02
HTT-208ENST00000510626 KIAA1109Q2LD37 5005 aa2.39□□□□□ -2.03
HTT-208ENST00000510626 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
HTT-208ENST00000510626 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
HTT-208ENST00000510626 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.04
HTT-208ENST00000510626 LCE1AQ5T7P2 110 aa2.34□□□□□ -2.04
HTT-208ENST00000510626 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
HTT-208ENST00000510626 KRTAP17-1Q9BYP8 105 aa2.28□□□□□ -2.04
HTT-208ENST00000510626 LPAP08519 4548 aa2.28□□□□□ -2.04
HTT-208ENST00000510626 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
HTT-208ENST00000510626 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
HTT-208ENST00000510626 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
HTT-208ENST00000510626 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
HTT-208ENST00000510626 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
HTT-208ENST00000510626 KRTAP9-4Q9BYQ2 154 aa2.2□□□□□ -2.06
HTT-208ENST00000510626 LCE5AQ5TCM9 118 aa2.19□□□□□ -2.06
HTT-208ENST00000510626 LCE4AQ5TA78 99 aa2.18□□□□□ -2.06
HTT-208ENST00000510626 MT4P47944 62 aa2.17□□□□□ -2.06
HTT-208ENST00000510626 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
HTT-208ENST00000510626 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
HTT-208ENST00000510626 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.06
HTT-208ENST00000510626 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
HTT-208ENST00000510626 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
HTT-208ENST00000510626 KRTAP4-3Q9BYR4 195 aa2.15□□□□□ -2.07
HTT-208ENST00000510626 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
HTT-208ENST00000510626 KRTAP4-9Q9BYQ8 210 aa2.12□□□□□ -2.07
HTT-208ENST00000510626 LCE2AQ5TA79 106 aaPredicted RBP2.08□□□□□ -2.08
HTT-208ENST00000510626 KRTAP9-7A8MTY7 169 aa2.05□□□□□ -2.08
HTT-208ENST00000510626 KRTAP6-3Q3LI67 103 aa2.04□□□□□ -2.08
HTT-208ENST00000510626 MUC2Q02817 5179 aa2.01□□□□□ -2.09
HTT-208ENST00000510626 USH2AO75445 5202 aa1.98□□□□□ -2.09
HTT-208ENST00000510626 KRTAP20-1Q3LI63 56 aa1.97□□□□□ -2.09
HTT-208ENST00000510626 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
HTT-208ENST00000510626 FCGBPQ9Y6R7 5405 aaPredicted RBP1.94□□□□□ -2.1
HTT-208ENST00000510626 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
HTT-208ENST00000510626 LCE1EQ5T753 118 aa1.9□□□□□ -2.11
HTT-208ENST00000510626 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
HTT-208ENST00000510626 KMT2DO14686 5537 aa1.88□□□□□ -2.11
HTT-208ENST00000510626 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
HTT-208ENST00000510626 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
HTT-208ENST00000510626 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.76□□□□□ -2.13
HTT-208ENST00000510626 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
HTT-208ENST00000510626 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
HTT-208ENST00000510626 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
HTT-208ENST00000510626 SYNE2Q8WXH0 6885 aaKnown RBP1.73□□□□□ -2.13
HTT-208ENST00000510626 KRTAP4-11Q9BYQ6 195 aa1.72□□□□□ -2.13
HTT-208ENST00000510626 SSPOA2VEC9 5147 aa1.7□□□□□ -2.14
HTT-208ENST00000510626 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
HTT-208ENST00000510626 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
HTT-208ENST00000510626 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
HTT-208ENST00000510626 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
HTT-208ENST00000510626 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
HTT-208ENST00000510626 NEBP20929 6669 aa1.65□□□□□ -2.15
HTT-208ENST00000510626 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
HTT-208ENST00000510626 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
HTT-208ENST00000510626 KRTAP4-6Q9BYQ5 205 aa1.54□□□□□ -2.16
HTT-208ENST00000510626 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
HTT-208ENST00000510626 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
HTT-208ENST00000510626 KRTAP5-3Q6L8H2 238 aa1.44□□□□□ -2.18
HTT-208ENST00000510626 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
HTT-208ENST00000510626 OBSCNQ5VST9 7968 aa1.42□□□□□ -2.18
HTT-208ENST00000510626 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
HTT-208ENST00000510626 KRTAP5-2Q701N4 177 aa1.37□□□□□ -2.19
HTT-208ENST00000510626 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
HTT-208ENST00000510626 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
HTT-208ENST00000510626 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
HTT-208ENST00000510626 KRTAP4-12Q9BQ66 201 aa1.32□□□□□ -2.2
HTT-208ENST00000510626 KRTAP4-2Q9BYR5 136 aa1.32□□□□□ -2.2
HTT-208ENST00000510626 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
HTT-208ENST00000510626 KRTAP5-1Q6L8H4 278 aa1.25□□□□□ -2.21
HTT-208ENST00000510626 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
HTT-208ENST00000510626 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
HTT-208ENST00000510626 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
HTT-208ENST00000510626 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
HTT-208ENST00000510626 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
HTT-208ENST00000510626 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms