RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
KLHL3-209ENST00000508657 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
KLHL3-209ENST00000508657 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
KLHL3-209ENST00000508657 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
KLHL3-209ENST00000508657 MT1LQ93083 61 aa2.81□□□□□ -1.96
KLHL3-209ENST00000508657 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
KLHL3-209ENST00000508657 MT1EP04732 61 aa2.79□□□□□ -1.96
KLHL3-209ENST00000508657 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
KLHL3-209ENST00000508657 LRP2P98164 4655 aa2.78□□□□□ -1.96
KLHL3-209ENST00000508657 MT1MQ8N339 61 aa2.77□□□□□ -1.97
KLHL3-209ENST00000508657 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
KLHL3-209ENST00000508657 PRM1P04553 51 aa2.76□□□□□ -1.97
KLHL3-209ENST00000508657 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
KLHL3-209ENST00000508657 FLGP20930 4061 aaPredicted RBP2.71□□□□□ -1.98
KLHL3-209ENST00000508657 HERC2O95714 4834 aa2.7□□□□□ -1.98
KLHL3-209ENST00000508657 BIRC6Q9NR09 4857 aa2.69□□□□□ -1.98
KLHL3-209ENST00000508657 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
KLHL3-209ENST00000508657 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
KLHL3-209ENST00000508657 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
KLHL3-209ENST00000508657 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
KLHL3-209ENST00000508657 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.66□□□□□ -1.98
KLHL3-209ENST00000508657 LCE2AQ5TA79 106 aaPredicted RBP2.66□□□□□ -1.98
KLHL3-209ENST00000508657 MUC2Q02817 5179 aa2.58□□□□□ -2
KLHL3-209ENST00000508657 KRTAP2-2Q9BYT5 123 aa2.57□□□□□ -2
KLHL3-209ENST00000508657 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
KLHL3-209ENST00000508657 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
KLHL3-209ENST00000508657 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
KLHL3-209ENST00000508657 MT1AP04731 61 aa2.5□□□□□ -2.01
KLHL3-209ENST00000508657 HMCN2Q8NDA2 5059 aa2.48□□□□□ -2.01
KLHL3-209ENST00000508657 LCE4AQ5TA78 99 aa2.46□□□□□ -2.02
KLHL3-209ENST00000508657 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
KLHL3-209ENST00000508657 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
KLHL3-209ENST00000508657 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
KLHL3-209ENST00000508657 RNF213Q63HN8 5207 aa2.42□□□□□ -2.02
KLHL3-209ENST00000508657 FAT4Q6V0I7 4981 aa2.41□□□□□ -2.02
KLHL3-209ENST00000508657 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
KLHL3-209ENST00000508657 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
KLHL3-209ENST00000508657 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
KLHL3-209ENST00000508657 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
KLHL3-209ENST00000508657 KRTAP9-6A8MVA2 160 aa2.28□□□□□ -2.05
KLHL3-209ENST00000508657 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.05
KLHL3-209ENST00000508657 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
KLHL3-209ENST00000508657 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
KLHL3-209ENST00000508657 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
KLHL3-209ENST00000508657 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
KLHL3-209ENST00000508657 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
KLHL3-209ENST00000508657 KMT2DO14686 5537 aa2.16□□□□□ -2.06
KLHL3-209ENST00000508657 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
KLHL3-209ENST00000508657 KRTAP4-11Q9BYQ6 195 aa2.11□□□□□ -2.07
KLHL3-209ENST00000508657 USH2AO75445 5202 aa2.09□□□□□ -2.07
KLHL3-209ENST00000508657 NEBP20929 6669 aa2.08□□□□□ -2.08
KLHL3-209ENST00000508657 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
KLHL3-209ENST00000508657 SSPOA2VEC9 5147 aa2□□□□□ -2.09
KLHL3-209ENST00000508657 FCGBPQ9Y6R7 5405 aaPredicted RBP1.99□□□□□ -2.09
KLHL3-209ENST00000508657 KRTAP5-9P26371 169 aa1.87□□□□□ -2.11
KLHL3-209ENST00000508657 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
KLHL3-209ENST00000508657 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
KLHL3-209ENST00000508657 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
KLHL3-209ENST00000508657 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
KLHL3-209ENST00000508657 MDN1Q9NU22 5596 aa1.75□□□□□ -2.13
KLHL3-209ENST00000508657 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
KLHL3-209ENST00000508657 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
KLHL3-209ENST00000508657 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
KLHL3-209ENST00000508657 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
KLHL3-209ENST00000508657 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
KLHL3-209ENST00000508657 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
KLHL3-209ENST00000508657 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
KLHL3-209ENST00000508657 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.18
KLHL3-209ENST00000508657 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
KLHL3-209ENST00000508657 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
KLHL3-209ENST00000508657 KRTAP5-11Q6L8G4 156 aa1.22□□□□□ -2.21
KLHL3-209ENST00000508657 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
KLHL3-209ENST00000508657 KRTAP5-1Q6L8H4 278 aa1.21□□□□□ -2.22
KLHL3-209ENST00000508657 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
KLHL3-209ENST00000508657 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
KLHL3-209ENST00000508657 KRTAP5-7Q6L8G8 165 aa1.01□□□□□ -2.25
KLHL3-209ENST00000508657 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 96.3 ms