RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
ITGA3-204ENST00000505306 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.55
ITGA3-204ENST00000505306 FLGP20930 4061 aaPredicted RBP5.39□□□□□ -1.55
ITGA3-204ENST00000505306 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
ITGA3-204ENST00000505306 MT4P47944 62 aa5.38□□□□□ -1.55
ITGA3-204ENST00000505306 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
ITGA3-204ENST00000505306 MT1MQ8N339 61 aa5.31□□□□□ -1.56
ITGA3-204ENST00000505306 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
ITGA3-204ENST00000505306 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
ITGA3-204ENST00000505306 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
ITGA3-204ENST00000505306 MT3P25713 68 aa5.17□□□□□ -1.58
ITGA3-204ENST00000505306 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
ITGA3-204ENST00000505306 MUC2Q02817 5179 aa5.16□□□□□ -1.58
ITGA3-204ENST00000505306 HMCN2Q8NDA2 5059 aa5.15□□□□□ -1.59
ITGA3-204ENST00000505306 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
ITGA3-204ENST00000505306 SYNE2Q8WXH0 6885 aaKnown RBP5.13□□□□□ -1.59
ITGA3-204ENST00000505306 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
ITGA3-204ENST00000505306 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
ITGA3-204ENST00000505306 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
ITGA3-204ENST00000505306 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
ITGA3-204ENST00000505306 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
ITGA3-204ENST00000505306 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
ITGA3-204ENST00000505306 PRM1P04553 51 aa4.97□□□□□ -1.61
ITGA3-204ENST00000505306 KRTAP2-3P0C7H8 128 aa4.96□□□□□ -1.62
ITGA3-204ENST00000505306 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
ITGA3-204ENST00000505306 KRTAP2-1Q9BYU5 128 aa4.96□□□□□ -1.62
ITGA3-204ENST00000505306 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
ITGA3-204ENST00000505306 MT1AP04731 61 aa4.89□□□□□ -1.63
ITGA3-204ENST00000505306 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
ITGA3-204ENST00000505306 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
ITGA3-204ENST00000505306 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
ITGA3-204ENST00000505306 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
ITGA3-204ENST00000505306 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
ITGA3-204ENST00000505306 LCE4AQ5TA78 99 aa4.69□□□□□ -1.66
ITGA3-204ENST00000505306 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
ITGA3-204ENST00000505306 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
ITGA3-204ENST00000505306 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
ITGA3-204ENST00000505306 USH2AO75445 5202 aa4.49□□□□□ -1.69
ITGA3-204ENST00000505306 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
ITGA3-204ENST00000505306 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
ITGA3-204ENST00000505306 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
ITGA3-204ENST00000505306 KMT2DO14686 5537 aa4.36□□□□□ -1.71
ITGA3-204ENST00000505306 NEBP20929 6669 aa4.33□□□□□ -1.72
ITGA3-204ENST00000505306 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
ITGA3-204ENST00000505306 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
ITGA3-204ENST00000505306 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
ITGA3-204ENST00000505306 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
ITGA3-204ENST00000505306 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
ITGA3-204ENST00000505306 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
ITGA3-204ENST00000505306 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
ITGA3-204ENST00000505306 GPR98Q8WXG9 6306 aa4.03□□□□□ -1.76
ITGA3-204ENST00000505306 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
ITGA3-204ENST00000505306 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.78
ITGA3-204ENST00000505306 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
ITGA3-204ENST00000505306 MUC19Q7Z5P9 8384 aa3.75□□□□□ -1.81
ITGA3-204ENST00000505306 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
ITGA3-204ENST00000505306 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
ITGA3-204ENST00000505306 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
ITGA3-204ENST00000505306 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
ITGA3-204ENST00000505306 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
ITGA3-204ENST00000505306 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
ITGA3-204ENST00000505306 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
ITGA3-204ENST00000505306 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
ITGA3-204ENST00000505306 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
ITGA3-204ENST00000505306 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
ITGA3-204ENST00000505306 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
ITGA3-204ENST00000505306 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
ITGA3-204ENST00000505306 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
ITGA3-204ENST00000505306 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
ITGA3-204ENST00000505306 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
ITGA3-204ENST00000505306 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
ITGA3-204ENST00000505306 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
ITGA3-204ENST00000505306 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
ITGA3-204ENST00000505306 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
ITGA3-204ENST00000505306 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
ITGA3-204ENST00000505306 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
ITGA3-204ENST00000505306 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
ITGA3-204ENST00000505306 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 42.8 ms