RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 DCAF8L2P0C7V8 631 aa30.01■■■□□ 2.4
ITGA3-204ENST00000505306 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
ITGA3-204ENST00000505306 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
ITGA3-204ENST00000505306 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
ITGA3-204ENST00000505306 EHMT2Q96KQ7 1210 aa26.89■■□□□ 1.9
ITGA3-204ENST00000505306 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.83
ITGA3-204ENST00000505306 APLP2Q06481 763 aa26.38■■□□□ 1.81
ITGA3-204ENST00000505306 RANGAP1P46060 587 aaPredicted RBP25.98■■□□□ 1.75
ITGA3-204ENST00000505306 TTBK1Q5TCY1 1321 aaPredicted RBP25.84■■□□□ 1.73
ITGA3-204ENST00000505306 ATP1B4Q9UN42 357 aaPredicted RBP25.82■■□□□ 1.72
ITGA3-204ENST00000505306 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
ITGA3-204ENST00000505306 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
ITGA3-204ENST00000505306 PELP1Q8IZL8 1130 aaKnown RBP25.52■■□□□ 1.68
ITGA3-204ENST00000505306 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
ITGA3-204ENST00000505306 ABCC9O60706 1549 aa25.33■■□□□ 1.65
ITGA3-204ENST00000505306 PABPN1Q86U42 306 aaKnown RBP eCLIP25.18■■□□□ 1.62
ITGA3-204ENST00000505306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.12■■□□□ 1.61
ITGA3-204ENST00000505306 HNRNPUL2Q1KMD3 747 aaKnown RBP25.12■■□□□ 1.61
ITGA3-204ENST00000505306 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
ITGA3-204ENST00000505306 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
ITGA3-204ENST00000505306 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
ITGA3-204ENST00000505306 CENPBP07199 599 aaPredicted RBP24.87■■□□□ 1.57
ITGA3-204ENST00000505306 MYT1Q01538 1121 aa24.8■■□□□ 1.56
ITGA3-204ENST00000505306 HRCP23327 699 aa24.77■■□□□ 1.56
ITGA3-204ENST00000505306 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
ITGA3-204ENST00000505306 ITGAEP38570 1179 aa24.64■■□□□ 1.54
ITGA3-204ENST00000505306 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
ITGA3-204ENST00000505306 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
ITGA3-204ENST00000505306 FBLN2P98095 1184 aa24.5■■□□□ 1.51
ITGA3-204ENST00000505306 TRIM26Q12899 539 aaPredicted RBP24.32■■□□□ 1.48
ITGA3-204ENST00000505306 POLR3GLQ9BT43 218 aa24.31■■□□□ 1.48
ITGA3-204ENST00000505306 YTHDC1Q96MU7 727 aaKnown RBP24.29■■□□□ 1.48
ITGA3-204ENST00000505306 LOC105371045A0A1W2PR82 267 aa24.29■■□□□ 1.48
ITGA3-204ENST00000505306 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
ITGA3-204ENST00000505306 FAM50AQ14320 339 aaKnown RBP24.09■■□□□ 1.45
ITGA3-204ENST00000505306 NEFLP07196 543 aa24.02■■□□□ 1.44
ITGA3-204ENST00000505306 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
ITGA3-204ENST00000505306 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
ITGA3-204ENST00000505306 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
ITGA3-204ENST00000505306 ARID3CA6NKF2 412 aa23.9■■□□□ 1.42
ITGA3-204ENST00000505306 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
ITGA3-204ENST00000505306 BCANQ96GW7 911 aa23.72■■□□□ 1.39
ITGA3-204ENST00000505306 NPM1P06748 294 aaKnown RBP eCLIP23.71■■□□□ 1.39
ITGA3-204ENST00000505306 ZNF777Q9ULD5 760 aaPredicted RBP23.66■■□□□ 1.38
ITGA3-204ENST00000505306 ZNF326Q5BKZ1 582 aaKnown RBP23.64■■□□□ 1.38
ITGA3-204ENST00000505306 ESF1Q9H501 851 aaKnown RBP23.64■■□□□ 1.38
ITGA3-204ENST00000505306 CDK11AQ9UQ88 783 aaPredicted RBP23.62■■□□□ 1.37
ITGA3-204ENST00000505306 CSRNP3Q8WYN3 585 aa23.62■■□□□ 1.37
ITGA3-204ENST00000505306 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
ITGA3-204ENST00000505306 NEUROD1Q13562 356 aa23.61■■□□□ 1.37
ITGA3-204ENST00000505306 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
ITGA3-204ENST00000505306 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
ITGA3-204ENST00000505306 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
ITGA3-204ENST00000505306 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
ITGA3-204ENST00000505306 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
ITGA3-204ENST00000505306 CCDC180Q9P1Z9 1646 aa23.43■■□□□ 1.34
ITGA3-204ENST00000505306 DAXXQ9UER7 740 aaPredicted RBP23.37■■□□□ 1.33
ITGA3-204ENST00000505306 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
ITGA3-204ENST00000505306 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
ITGA3-204ENST00000505306 ACIN1Q9UKV3 1341 aaKnown RBP23.29■■□□□ 1.32
ITGA3-204ENST00000505306 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
ITGA3-204ENST00000505306 CLSPNQ9HAW4 1339 aa23.14■■□□□ 1.29
ITGA3-204ENST00000505306 NEFMP07197 916 aa23.13■■□□□ 1.29
ITGA3-204ENST00000505306 NACADO15069 1562 aa23.09■■□□□ 1.29
ITGA3-204ENST00000505306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
ITGA3-204ENST00000505306 ERCC6Q03468 1493 aa23.08■■□□□ 1.29
ITGA3-204ENST00000505306 KCNH8Q96L42 1107 aa23.04■■□□□ 1.28
ITGA3-204ENST00000505306 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
ITGA3-204ENST00000505306 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
ITGA3-204ENST00000505306 ANP32CO43423 234 aa23.02■■□□□ 1.28
ITGA3-204ENST00000505306 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
ITGA3-204ENST00000505306 BAZ1BQ9UIG0 1483 aaKnown RBP23■■□□□ 1.27
ITGA3-204ENST00000505306 ZNF316A6NFI3 1004 aaPredicted RBP22.98■■□□□ 1.27
ITGA3-204ENST00000505306 ZBTB47Q9UFB7 747 aaPredicted RBP22.97■■□□□ 1.27
ITGA3-204ENST00000505306 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
ITGA3-204ENST00000505306 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
ITGA3-204ENST00000505306 RTL5Q5HYW3 569 aaPredicted RBP22.91■■□□□ 1.26
ITGA3-204ENST00000505306 PLEKHD1A6NEE1 506 aa22.89■■□□□ 1.25
ITGA3-204ENST00000505306 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
ITGA3-204ENST00000505306 BCL11AQ9H165 835 aa22.86■■□□□ 1.25
ITGA3-204ENST00000505306 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
ITGA3-204ENST00000505306 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
ITGA3-204ENST00000505306 TONSLQ96HA7 1378 aa22.81■■□□□ 1.24
ITGA3-204ENST00000505306 TRHP20396 242 aaPredicted RBP22.78■■□□□ 1.24
ITGA3-204ENST00000505306 RSF1Q96T23 1441 aaPredicted RBP22.78■■□□□ 1.24
ITGA3-204ENST00000505306 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
ITGA3-204ENST00000505306 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
ITGA3-204ENST00000505306 C14orf37Q86TY3 774 aa22.71■■□□□ 1.23
ITGA3-204ENST00000505306 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
ITGA3-204ENST00000505306 WRNQ14191 1432 aaPredicted RBP eCLIP22.7■■□□□ 1.22
ITGA3-204ENST00000505306 CLIP1P30622 1438 aa22.67■■□□□ 1.22
ITGA3-204ENST00000505306 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
ITGA3-204ENST00000505306 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
ITGA3-204ENST00000505306 A0A0G2JS52 829 aa22.62■■□□□ 1.21
ITGA3-204ENST00000505306 RRP7BPQ9NSQ0 103 aa22.62■■□□□ 1.21
ITGA3-204ENST00000505306 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
ITGA3-204ENST00000505306 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
ITGA3-204ENST00000505306 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
ITGA3-204ENST00000505306 EEA1Q15075 1411 aa22.52■■□□□ 1.2
ITGA3-204ENST00000505306 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms