RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RYR3Q15413 4870 aa1.61□□□□□ -2.15
LINC02397-201ENST00000504409 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
LINC02397-201ENST00000504409 KRTAP9-4Q9BYQ2 154 aa1.58□□□□□ -2.16
LINC02397-201ENST00000504409 HERC2O95714 4834 aa1.57□□□□□ -2.16
LINC02397-201ENST00000504409 LRP2P98164 4655 aa1.57□□□□□ -2.16
LINC02397-201ENST00000504409 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
LINC02397-201ENST00000504409 LCE5AQ5TCM9 118 aa1.56□□□□□ -2.16
LINC02397-201ENST00000504409 KRTAP9-7A8MTY7 169 aa1.55□□□□□ -2.16
LINC02397-201ENST00000504409 PCLOQ9Y6V0 5065 aa1.53□□□□□ -2.16
LINC02397-201ENST00000504409 LCE4AQ5TA78 99 aa1.53□□□□□ -2.16
LINC02397-201ENST00000504409 KRTAP4-8A0A0G2JLE6 195 aa1.52□□□□□ -2.17
LINC02397-201ENST00000504409 KRTAP4-8Q9BYQ9 185 aa1.52□□□□□ -2.17
LINC02397-201ENST00000504409 MT4P47944 62 aa1.51□□□□□ -2.17
LINC02397-201ENST00000504409 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
LINC02397-201ENST00000504409 EPPK1P58107 5090 aaKnown RBP1.5□□□□□ -2.17
LINC02397-201ENST00000504409 HYDINQ4G0P3 5121 aa1.48□□□□□ -2.17
LINC02397-201ENST00000504409 KMT2CQ8NEZ4 4911 aaKnown RBP1.44□□□□□ -2.18
LINC02397-201ENST00000504409 ABCA13Q86UQ4 5058 aa1.43□□□□□ -2.18
LINC02397-201ENST00000504409 KRTAP4-7Q9BYR0 210 aa1.43□□□□□ -2.18
LINC02397-201ENST00000504409 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
LINC02397-201ENST00000504409 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.42□□□□□ -2.18
LINC02397-201ENST00000504409 HMCN2Q8NDA2 5059 aa1.4□□□□□ -2.18
LINC02397-201ENST00000504409 LCE1BQ5T7P3 118 aa1.39□□□□□ -2.19
LINC02397-201ENST00000504409 KIAA1109Q2LD37 5005 aa1.38□□□□□ -2.19
LINC02397-201ENST00000504409 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
LINC02397-201ENST00000504409 LOC100996750A0A140TA64 210 aa1.38□□□□□ -2.19
LINC02397-201ENST00000504409 LCE1EQ5T753 118 aa1.38□□□□□ -2.19
LINC02397-201ENST00000504409 LCE1DQ5T752 114 aa1.36□□□□□ -2.19
LINC02397-201ENST00000504409 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.19
LINC02397-201ENST00000504409 KRTAP4-9Q9BYQ8 210 aa1.33□□□□□ -2.2
LINC02397-201ENST00000504409 KRTAP5-5Q701N2 237 aaPredicted RBP1.31□□□□□ -2.2
LINC02397-201ENST00000504409 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
LINC02397-201ENST00000504409 KRTAP5-9P26371 169 aa1.29□□□□□ -2.2
LINC02397-201ENST00000504409 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
LINC02397-201ENST00000504409 KRTAP4-3Q9BYR4 195 aa1.29□□□□□ -2.2
LINC02397-201ENST00000504409 FAT4Q6V0I7 4981 aa1.27□□□□□ -2.21
LINC02397-201ENST00000504409 UBR4Q5T4S7 5183 aa1.26□□□□□ -2.21
LINC02397-201ENST00000504409 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
LINC02397-201ENST00000504409 LCE1FQ5T754 118 aa1.25□□□□□ -2.21
LINC02397-201ENST00000504409 KRTAP9-9Q9BYP9 154 aa1.25□□□□□ -2.21
LINC02397-201ENST00000504409 RNF213Q63HN8 5207 aa1.21□□□□□ -2.21
LINC02397-201ENST00000504409 NEBP20929 6669 aa1.21□□□□□ -2.22
LINC02397-201ENST00000504409 OBSCNQ5VST9 7968 aa1.2□□□□□ -2.22
LINC02397-201ENST00000504409 MDN1Q9NU22 5596 aa1.19□□□□□ -2.22
LINC02397-201ENST00000504409 KRTAP5-4Q6L8H1 288 aa1.18□□□□□ -2.22
LINC02397-201ENST00000504409 KRTAP4-11Q9BYQ6 195 aa1.14□□□□□ -2.23
LINC02397-201ENST00000504409 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
LINC02397-201ENST00000504409 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
LINC02397-201ENST00000504409 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.24
LINC02397-201ENST00000504409 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
LINC02397-201ENST00000504409 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
LINC02397-201ENST00000504409 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
LINC02397-201ENST00000504409 KRTAP4-6Q9BYQ5 205 aa1.05□□□□□ -2.24
LINC02397-201ENST00000504409 USH2AO75445 5202 aa1.04□□□□□ -2.24
LINC02397-201ENST00000504409 HMCN1Q96RW7 5635 aa1.02□□□□□ -2.25
LINC02397-201ENST00000504409 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
LINC02397-201ENST00000504409 KRTAP5-3Q6L8H2 238 aa1.02□□□□□ -2.25
LINC02397-201ENST00000504409 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
LINC02397-201ENST00000504409 MUC5ACP98088 5654 aa1.01□□□□□ -2.25
LINC02397-201ENST00000504409 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
LINC02397-201ENST00000504409 GPR98Q8WXG9 6306 aa1□□□□□ -2.25
LINC02397-201ENST00000504409 MUC2Q02817 5179 aa1□□□□□ -2.25
LINC02397-201ENST00000504409 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
LINC02397-201ENST00000504409 SSPOA2VEC9 5147 aa0.99□□□□□ -2.25
LINC02397-201ENST00000504409 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
LINC02397-201ENST00000504409 KRTAP4-12Q9BQ66 201 aa0.97□□□□□ -2.25
LINC02397-201ENST00000504409 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
LINC02397-201ENST00000504409 FCGBPQ9Y6R7 5405 aaPredicted RBP0.95□□□□□ -2.26
LINC02397-201ENST00000504409 KMT2DO14686 5537 aa0.95□□□□□ -2.26
LINC02397-201ENST00000504409 KRTAP4-2Q9BYR5 136 aa0.95□□□□□ -2.26
LINC02397-201ENST00000504409 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
LINC02397-201ENST00000504409 KRTAP4-4Q9BYR3 166 aa0.88□□□□□ -2.27
LINC02397-201ENST00000504409 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
LINC02397-201ENST00000504409 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.28
LINC02397-201ENST00000504409 KRTAP5-7Q6L8G8 165 aa0.83□□□□□ -2.28
LINC02397-201ENST00000504409 MUC19Q7Z5P9 8384 aa0.73□□□□□ -2.29
LINC02397-201ENST00000504409 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 133.8 ms