RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 CRIPTQ9P021 101 aa2.22□□□□□ -2.05
NEDD4-203ENST00000502612 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
NEDD4-203ENST00000502612 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
NEDD4-203ENST00000502612 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
NEDD4-203ENST00000502612 MYCBP2O75592 4640 aa2.19□□□□□ -2.06
NEDD4-203ENST00000502612 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
NEDD4-203ENST00000502612 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
NEDD4-203ENST00000502612 MUC17Q685J3 4493 aa2.17□□□□□ -2.06
NEDD4-203ENST00000502612 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
NEDD4-203ENST00000502612 KRTAP19-2Q3LHN2 52 aa2.14□□□□□ -2.07
NEDD4-203ENST00000502612 M0R2T5 61 aa2.13□□□□□ -2.07
NEDD4-203ENST00000502612 LRP2P98164 4655 aa2.12□□□□□ -2.07
NEDD4-203ENST00000502612 HERC1Q15751 4861 aa2.12□□□□□ -2.07
NEDD4-203ENST00000502612 LPAP08519 4548 aa2.12□□□□□ -2.07
NEDD4-203ENST00000502612 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
NEDD4-203ENST00000502612 SPRR2GQ9BYE4 73 aa2.05□□□□□ -2.08
NEDD4-203ENST00000502612 TNP1P09430 55 aa2.04□□□□□ -2.08
NEDD4-203ENST00000502612 MT1HP80294 61 aa2.04□□□□□ -2.08
NEDD4-203ENST00000502612 HMCN2Q8NDA2 5059 aa2.03□□□□□ -2.08
NEDD4-203ENST00000502612 C10orf95Q9H7T3 257 aa2.03□□□□□ -2.08
NEDD4-203ENST00000502612 UBR4Q5T4S7 5183 aa2.01□□□□□ -2.09
NEDD4-203ENST00000502612 MT2AP02795 61 aa1.99□□□□□ -2.09
NEDD4-203ENST00000502612 FLGP20930 4061 aaPredicted RBP1.98□□□□□ -2.09
NEDD4-203ENST00000502612 MUC2Q02817 5179 aa1.97□□□□□ -2.09
NEDD4-203ENST00000502612 MT1FP04733 61 aa1.96□□□□□ -2.1
NEDD4-203ENST00000502612 KRTAP19-8Q3LI54 63 aa1.96□□□□□ -2.1
NEDD4-203ENST00000502612 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
NEDD4-203ENST00000502612 CRCT1Q9UGL9 99 aa1.93□□□□□ -2.1
NEDD4-203ENST00000502612 MT1BP07438 61 aa1.88□□□□□ -2.11
NEDD4-203ENST00000502612 FAT4Q6V0I7 4981 aa1.87□□□□□ -2.11
NEDD4-203ENST00000502612 MT1XP80297 61 aa1.85□□□□□ -2.11
NEDD4-203ENST00000502612 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
NEDD4-203ENST00000502612 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
NEDD4-203ENST00000502612 KRTAP19-6Q3LI70 58 aa1.72□□□□□ -2.13
NEDD4-203ENST00000502612 KRTAP19-5Q3LI72 72 aa1.71□□□□□ -2.14
NEDD4-203ENST00000502612 USH2AO75445 5202 aa1.67□□□□□ -2.14
NEDD4-203ENST00000502612 KRTAP19-7Q3SYF9 63 aa1.65□□□□□ -2.15
NEDD4-203ENST00000502612 MT1EP04732 61 aa1.63□□□□□ -2.15
NEDD4-203ENST00000502612 FSIP2Q5CZC0 6907 aa1.63□□□□□ -2.15
NEDD4-203ENST00000502612 INE1O15225 51 aa1.62□□□□□ -2.15
NEDD4-203ENST00000502612 MT1LQ93083 61 aa1.62□□□□□ -2.15
NEDD4-203ENST00000502612 MT1GP13640 62 aa1.59□□□□□ -2.15
NEDD4-203ENST00000502612 SSPOA2VEC9 5147 aa1.59□□□□□ -2.15
NEDD4-203ENST00000502612 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
NEDD4-203ENST00000502612 KMT2DO14686 5537 aa1.53□□□□□ -2.16
NEDD4-203ENST00000502612 MT1MQ8N339 61 aa1.53□□□□□ -2.16
NEDD4-203ENST00000502612 SPRR2FQ96RM1 72 aa1.53□□□□□ -2.16
NEDD4-203ENST00000502612 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
NEDD4-203ENST00000502612 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
NEDD4-203ENST00000502612 KRTAP2-4Q9BYR9 128 aa1.51□□□□□ -2.17
NEDD4-203ENST00000502612 KRTAP2-1Q9BYU5 128 aa1.51□□□□□ -2.17
NEDD4-203ENST00000502612 SPRR2EP22531 72 aa1.46□□□□□ -2.18
NEDD4-203ENST00000502612 SPRR2BP35325 72 aa1.46□□□□□ -2.18
NEDD4-203ENST00000502612 SPRR2AP35326 72 aa1.46□□□□□ -2.18
NEDD4-203ENST00000502612 KRTAP20-1Q3LI63 56 aa1.46□□□□□ -2.18
NEDD4-203ENST00000502612 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
NEDD4-203ENST00000502612 SPRR2DP22532 72 aa1.42□□□□□ -2.18
NEDD4-203ENST00000502612 MT1AP04731 61 aa1.4□□□□□ -2.19
NEDD4-203ENST00000502612 DSTQ03001 7570 aaKnown RBP1.37□□□□□ -2.19
NEDD4-203ENST00000502612 MUC12Q9UKN1 5478 aa1.37□□□□□ -2.19
NEDD4-203ENST00000502612 NEBP20929 6669 aa1.34□□□□□ -2.19
NEDD4-203ENST00000502612 KRTAP6-1Q3LI64 71 aa1.33□□□□□ -2.2
NEDD4-203ENST00000502612 MDN1Q9NU22 5596 aa1.32□□□□□ -2.2
NEDD4-203ENST00000502612 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
NEDD4-203ENST00000502612 MT4P47944 62 aa1.26□□□□□ -2.21
NEDD4-203ENST00000502612 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
NEDD4-203ENST00000502612 GPR98Q8WXG9 6306 aa1.24□□□□□ -2.21
NEDD4-203ENST00000502612 KRTAP6-2Q3LI66 62 aa1.22□□□□□ -2.21
NEDD4-203ENST00000502612 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
NEDD4-203ENST00000502612 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
NEDD4-203ENST00000502612 PRM1P04553 51 aa1.14□□□□□ -2.23
NEDD4-203ENST00000502612 HMCN1Q96RW7 5635 aa1.11□□□□□ -2.23
NEDD4-203ENST00000502612 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
NEDD4-203ENST00000502612 AHNAKQ09666 5890 aaKnown RBP0.99□□□□□ -2.25
NEDD4-203ENST00000502612 MUC5ACP98088 5654 aa0.95□□□□□ -2.26
NEDD4-203ENST00000502612 MUC5BQ9HC84 5762 aaPredicted RBP0.88□□□□□ -2.27
NEDD4-203ENST00000502612 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
NEDD4-203ENST00000502612 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 198.3 ms