RNA–Protein interactions for RNA: ENST00000498666.5

ITGB2-212, Transcript of integrin subunit beta 2, humanhuman

TSL 1 (best)

Gene ITGB2, Length 4,781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-212ENST00000498666 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
ITGB2-212ENST00000498666 HMCN2Q8NDA2 5059 aa4.36□□□□□ -1.71
ITGB2-212ENST00000498666 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
ITGB2-212ENST00000498666 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
ITGB2-212ENST00000498666 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
ITGB2-212ENST00000498666 MT3P25713 68 aa4.24□□□□□ -1.73
ITGB2-212ENST00000498666 MT1MQ8N339 61 aa4.24□□□□□ -1.73
ITGB2-212ENST00000498666 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
ITGB2-212ENST00000498666 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
ITGB2-212ENST00000498666 LCE2DQ5TA82 110 aaPredicted RBP4.17□□□□□ -1.74
ITGB2-212ENST00000498666 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
ITGB2-212ENST00000498666 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
ITGB2-212ENST00000498666 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
ITGB2-212ENST00000498666 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.74
ITGB2-212ENST00000498666 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
ITGB2-212ENST00000498666 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
ITGB2-212ENST00000498666 MT1AP04731 61 aa4.03□□□□□ -1.76
ITGB2-212ENST00000498666 KRTAP9-2Q9BYQ4 174 aa4.01□□□□□ -1.77
ITGB2-212ENST00000498666 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
ITGB2-212ENST00000498666 PRM1P04553 51 aa3.98□□□□□ -1.77
ITGB2-212ENST00000498666 USH2AO75445 5202 aa3.89□□□□□ -1.79
ITGB2-212ENST00000498666 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
ITGB2-212ENST00000498666 MT4P47944 62 aa3.87□□□□□ -1.79
ITGB2-212ENST00000498666 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
ITGB2-212ENST00000498666 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
ITGB2-212ENST00000498666 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
ITGB2-212ENST00000498666 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
ITGB2-212ENST00000498666 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
ITGB2-212ENST00000498666 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
ITGB2-212ENST00000498666 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
ITGB2-212ENST00000498666 KMT2DO14686 5537 aa3.74□□□□□ -1.81
ITGB2-212ENST00000498666 LCE4AQ5TA78 99 aa3.72□□□□□ -1.81
ITGB2-212ENST00000498666 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
ITGB2-212ENST00000498666 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
ITGB2-212ENST00000498666 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
ITGB2-212ENST00000498666 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
ITGB2-212ENST00000498666 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
ITGB2-212ENST00000498666 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
ITGB2-212ENST00000498666 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
ITGB2-212ENST00000498666 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
ITGB2-212ENST00000498666 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
ITGB2-212ENST00000498666 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
ITGB2-212ENST00000498666 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
ITGB2-212ENST00000498666 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
ITGB2-212ENST00000498666 KRTAP5-9P26371 169 aa3.28□□□□□ -1.88
ITGB2-212ENST00000498666 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
ITGB2-212ENST00000498666 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
ITGB2-212ENST00000498666 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ITGB2-212ENST00000498666 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
ITGB2-212ENST00000498666 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
ITGB2-212ENST00000498666 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
ITGB2-212ENST00000498666 NEBP20929 6669 aa3.08□□□□□ -1.92
ITGB2-212ENST00000498666 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
ITGB2-212ENST00000498666 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
ITGB2-212ENST00000498666 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
ITGB2-212ENST00000498666 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
ITGB2-212ENST00000498666 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
ITGB2-212ENST00000498666 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
ITGB2-212ENST00000498666 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
ITGB2-212ENST00000498666 MUC5ACP98088 5654 aa2.57□□□□□ -2
ITGB2-212ENST00000498666 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
ITGB2-212ENST00000498666 KRTAP4-12Q9BQ66 201 aa2.5□□□□□ -2.01
ITGB2-212ENST00000498666 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
ITGB2-212ENST00000498666 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
ITGB2-212ENST00000498666 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
ITGB2-212ENST00000498666 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
ITGB2-212ENST00000498666 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
ITGB2-212ENST00000498666 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
ITGB2-212ENST00000498666 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
ITGB2-212ENST00000498666 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
ITGB2-212ENST00000498666 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
ITGB2-212ENST00000498666 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
ITGB2-212ENST00000498666 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
ITGB2-212ENST00000498666 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
ITGB2-212ENST00000498666 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
ITGB2-212ENST00000498666 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
ITGB2-212ENST00000498666 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
ITGB2-212ENST00000498666 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 121.1 ms