RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
MACF1-224ENST00000496804 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
MACF1-224ENST00000496804 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
MACF1-224ENST00000496804 MT1MQ8N339 61 aa2.62□□□□□ -1.99
MACF1-224ENST00000496804 KRTAP4-9Q9BYQ8 210 aa2.61□□□□□ -1.99
MACF1-224ENST00000496804 EPPK1P58107 5090 aaKnown RBP2.57□□□□□ -2
MACF1-224ENST00000496804 MUC2Q02817 5179 aa2.56□□□□□ -2
MACF1-224ENST00000496804 KRTAP9-2Q9BYQ4 174 aa2.55□□□□□ -2
MACF1-224ENST00000496804 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
MACF1-224ENST00000496804 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
MACF1-224ENST00000496804 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
MACF1-224ENST00000496804 KRTAP9-7A8MTY7 169 aa2.51□□□□□ -2.01
MACF1-224ENST00000496804 MT1AP04731 61 aa2.51□□□□□ -2.01
MACF1-224ENST00000496804 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.01
MACF1-224ENST00000496804 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
MACF1-224ENST00000496804 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
MACF1-224ENST00000496804 LCE2DQ5TA82 110 aaPredicted RBP2.45□□□□□ -2.02
MACF1-224ENST00000496804 MT3P25713 68 aa2.43□□□□□ -2.02
MACF1-224ENST00000496804 SPRR2EP22531 72 aa2.43□□□□□ -2.02
MACF1-224ENST00000496804 SPRR2BP35325 72 aa2.43□□□□□ -2.02
MACF1-224ENST00000496804 SPRR2AP35326 72 aa2.43□□□□□ -2.02
MACF1-224ENST00000496804 LCE2AQ5TA79 106 aaPredicted RBP2.42□□□□□ -2.02
MACF1-224ENST00000496804 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
MACF1-224ENST00000496804 FCGBPQ9Y6R7 5405 aaPredicted RBP2.36□□□□□ -2.03
MACF1-224ENST00000496804 KMT2DO14686 5537 aa2.36□□□□□ -2.03
MACF1-224ENST00000496804 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
MACF1-224ENST00000496804 SPRR2DP22532 72 aa2.35□□□□□ -2.03
MACF1-224ENST00000496804 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.04
MACF1-224ENST00000496804 LCE1AQ5T7P2 110 aa2.32□□□□□ -2.04
MACF1-224ENST00000496804 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
MACF1-224ENST00000496804 LCE5AQ5TCM9 118 aa2.26□□□□□ -2.05
MACF1-224ENST00000496804 DSTQ03001 7570 aaKnown RBP2.25□□□□□ -2.05
MACF1-224ENST00000496804 KRTAP9-4Q9BYQ2 154 aa2.24□□□□□ -2.05
MACF1-224ENST00000496804 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
MACF1-224ENST00000496804 USH2AO75445 5202 aa2.22□□□□□ -2.05
MACF1-224ENST00000496804 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.2□□□□□ -2.06
MACF1-224ENST00000496804 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
MACF1-224ENST00000496804 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
MACF1-224ENST00000496804 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
MACF1-224ENST00000496804 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
MACF1-224ENST00000496804 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
MACF1-224ENST00000496804 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
MACF1-224ENST00000496804 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
MACF1-224ENST00000496804 MT4P47944 62 aa2.09□□□□□ -2.07
MACF1-224ENST00000496804 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
MACF1-224ENST00000496804 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
MACF1-224ENST00000496804 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
MACF1-224ENST00000496804 NEBP20929 6669 aa2.01□□□□□ -2.09
MACF1-224ENST00000496804 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
MACF1-224ENST00000496804 LCE4AQ5TA78 99 aa1.93□□□□□ -2.1
MACF1-224ENST00000496804 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
MACF1-224ENST00000496804 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
MACF1-224ENST00000496804 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
MACF1-224ENST00000496804 KRTAP4-6Q9BYQ5 205 aa1.71□□□□□ -2.14
MACF1-224ENST00000496804 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
MACF1-224ENST00000496804 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
MACF1-224ENST00000496804 KRTAP9-9Q9BYP9 154 aa1.65□□□□□ -2.14
MACF1-224ENST00000496804 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
MACF1-224ENST00000496804 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
MACF1-224ENST00000496804 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
MACF1-224ENST00000496804 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
MACF1-224ENST00000496804 KRTAP4-12Q9BQ66 201 aa1.52□□□□□ -2.17
MACF1-224ENST00000496804 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
MACF1-224ENST00000496804 KRTAP5-3Q6L8H2 238 aa1.49□□□□□ -2.17
MACF1-224ENST00000496804 KRTAP5-2Q701N4 177 aa1.46□□□□□ -2.18
MACF1-224ENST00000496804 KRTAP4-2Q9BYR5 136 aa1.45□□□□□ -2.18
MACF1-224ENST00000496804 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
MACF1-224ENST00000496804 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
MACF1-224ENST00000496804 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
MACF1-224ENST00000496804 KRTAP5-1Q6L8H4 278 aa1.35□□□□□ -2.19
MACF1-224ENST00000496804 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
MACF1-224ENST00000496804 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
MACF1-224ENST00000496804 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
MACF1-224ENST00000496804 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
MACF1-224ENST00000496804 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
MACF1-224ENST00000496804 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
MACF1-224ENST00000496804 PHGR1C9JFL3 82 aa1.15□□□□□ -2.22
MACF1-224ENST00000496804 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 140.4 ms