RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
MACF1-224ENST00000496804 MYT1Q01538 1121 aa14.48□□□□□ -0.09
MACF1-224ENST00000496804 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
MACF1-224ENST00000496804 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
MACF1-224ENST00000496804 NISCHQ9Y2I1 1504 aa14.14□□□□□ -0.15
MACF1-224ENST00000496804 HRCP23327 699 aa14.11□□□□□ -0.15
MACF1-224ENST00000496804 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
MACF1-224ENST00000496804 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
MACF1-224ENST00000496804 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
MACF1-224ENST00000496804 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
MACF1-224ENST00000496804 DCAF8L2P0C7V8 631 aa13.74□□□□□ -0.21
MACF1-224ENST00000496804 TRIM26Q12899 539 aaPredicted RBP13.52□□□□□ -0.24
MACF1-224ENST00000496804 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
MACF1-224ENST00000496804 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
MACF1-224ENST00000496804 YTHDC1Q96MU7 727 aaKnown RBP13.45□□□□□ -0.26
MACF1-224ENST00000496804 ERICH6Q7L0X2 663 aa13.44□□□□□ -0.26
MACF1-224ENST00000496804 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
MACF1-224ENST00000496804 TTBK1Q5TCY1 1321 aaPredicted RBP13.36□□□□□ -0.27
MACF1-224ENST00000496804 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
MACF1-224ENST00000496804 ACIN1Q9UKV3 1341 aaKnown RBP13.28□□□□□ -0.28
MACF1-224ENST00000496804 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
MACF1-224ENST00000496804 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
MACF1-224ENST00000496804 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
MACF1-224ENST00000496804 LOC105371045A0A1W2PR82 267 aa13.17□□□□□ -0.3
MACF1-224ENST00000496804 NEFLP07196 543 aa13.14□□□□□ -0.31
MACF1-224ENST00000496804 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
MACF1-224ENST00000496804 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
MACF1-224ENST00000496804 APLP2Q06481 763 aa13.02□□□□□ -0.32
MACF1-224ENST00000496804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.99□□□□□ -0.33
MACF1-224ENST00000496804 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
MACF1-224ENST00000496804 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
MACF1-224ENST00000496804 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
MACF1-224ENST00000496804 BCANQ96GW7 911 aa12.78□□□□□ -0.36
MACF1-224ENST00000496804 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.36
MACF1-224ENST00000496804 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
MACF1-224ENST00000496804 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
MACF1-224ENST00000496804 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
MACF1-224ENST00000496804 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
MACF1-224ENST00000496804 MYO15BQ96JP2 1530 aa12.62□□□□□ -0.39
MACF1-224ENST00000496804 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
MACF1-224ENST00000496804 CDK11AQ9UQ88 783 aaPredicted RBP12.61□□□□□ -0.39
MACF1-224ENST00000496804 RANGAP1P46060 587 aaPredicted RBP12.57□□□□□ -0.4
MACF1-224ENST00000496804 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
MACF1-224ENST00000496804 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
MACF1-224ENST00000496804 FKBP8Q14318 412 aa12.52□□□□□ -0.41
MACF1-224ENST00000496804 MIER1Q8N108 512 aa12.52□□□□□ -0.41
MACF1-224ENST00000496804 EIF5BO60841 1220 aaKnown RBP12.5□□□□□ -0.41
MACF1-224ENST00000496804 CSRNP3Q8WYN3 585 aa12.44□□□□□ -0.42
MACF1-224ENST00000496804 SUPT16HQ9Y5B9 1047 aaKnown RBP12.39□□□□□ -0.43
MACF1-224ENST00000496804 ANP32AP39687 249 aaKnown RBP12.37□□□□□ -0.43
MACF1-224ENST00000496804 NBR1Q14596 966 aa12.37□□□□□ -0.43
MACF1-224ENST00000496804 GLIPR1L2Q4G1C9 344 aa12.36□□□□□ -0.43
MACF1-224ENST00000496804 ITGAEP38570 1179 aa12.35□□□□□ -0.43
MACF1-224ENST00000496804 ANP32CO43423 234 aa12.35□□□□□ -0.43
MACF1-224ENST00000496804 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
MACF1-224ENST00000496804 ATP1B4Q9UN42 357 aaPredicted RBP12.24□□□□□ -0.45
MACF1-224ENST00000496804 DEKP35659 375 aaKnown RBP12.22□□□□□ -0.45
MACF1-224ENST00000496804 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
MACF1-224ENST00000496804 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
MACF1-224ENST00000496804 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
MACF1-224ENST00000496804 NPM2Q86SE8 214 aaKnown RBP12.19□□□□□ -0.46
MACF1-224ENST00000496804 TRIM52Q96A61 297 aa12.19□□□□□ -0.46
MACF1-224ENST00000496804 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
MACF1-224ENST00000496804 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
MACF1-224ENST00000496804 DDX10Q13206 875 aaKnown RBP12.14□□□□□ -0.47
MACF1-224ENST00000496804 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
MACF1-224ENST00000496804 HNRNPUQ00839 825 aaKnown RBP eCLIP12.13□□□□□ -0.47
MACF1-224ENST00000496804 IRX6P78412 446 aaPredicted RBP12.11□□□□□ -0.47
MACF1-224ENST00000496804 NOP58Q9Y2X3 529 aaKnown RBP12.08□□□□□ -0.47
MACF1-224ENST00000496804 ERICH6BQ5W0A0 696 aa12.05□□□□□ -0.48
MACF1-224ENST00000496804 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
MACF1-224ENST00000496804 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
MACF1-224ENST00000496804 NEFMP07197 916 aa12.02□□□□□ -0.49
MACF1-224ENST00000496804 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
MACF1-224ENST00000496804 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.5
MACF1-224ENST00000496804 PPM1GO15355 546 aaPredicted RBP11.95□□□□□ -0.5
MACF1-224ENST00000496804 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
MACF1-224ENST00000496804 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
MACF1-224ENST00000496804 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
MACF1-224ENST00000496804 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
MACF1-224ENST00000496804 DDRGK1Q96HY6 314 aa11.88□□□□□ -0.51
MACF1-224ENST00000496804 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
MACF1-224ENST00000496804 ARXQ96QS3 562 aa11.86□□□□□ -0.51
MACF1-224ENST00000496804 B4GALNT3Q6L9W6 998 aa11.86□□□□□ -0.51
MACF1-224ENST00000496804 NAP1L5Q96NT1 182 aaPredicted RBP11.85□□□□□ -0.51
MACF1-224ENST00000496804 HIRIP3Q9BW71 556 aaPredicted RBP11.85□□□□□ -0.51
MACF1-224ENST00000496804 TONSLQ96HA7 1378 aa11.84□□□□□ -0.51
MACF1-224ENST00000496804 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
MACF1-224ENST00000496804 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
MACF1-224ENST00000496804 CEP162Q5TB80 1403 aa11.83□□□□□ -0.52
MACF1-224ENST00000496804 CCER2I3L3R5 266 aa11.79□□□□□ -0.52
MACF1-224ENST00000496804 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
MACF1-224ENST00000496804 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.53
MACF1-224ENST00000496804 RSPH6AQ9H0K4 717 aa11.75□□□□□ -0.53
MACF1-224ENST00000496804 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
MACF1-224ENST00000496804 TRIM44Q96DX7 344 aaPredicted RBP11.74□□□□□ -0.53
MACF1-224ENST00000496804 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
MACF1-224ENST00000496804 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
MACF1-224ENST00000496804 ZNF326Q5BKZ1 582 aaKnown RBP11.71□□□□□ -0.53
MACF1-224ENST00000496804 PKNOX2Q96KN3 472 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms