RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 KRTAP2-3P0C7H8 128 aa6.71□□□□□ -1.34
CHKB-CPT1B-203ENST00000492556 KRTAP2-4Q9BYR9 128 aa6.71□□□□□ -1.34
CHKB-CPT1B-203ENST00000492556 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
CHKB-CPT1B-203ENST00000492556 LCE3DQ9BYE3 92 aa6.71□□□□□ -1.34
CHKB-CPT1B-203ENST00000492556 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
CHKB-CPT1B-203ENST00000492556 UBR4Q5T4S7 5183 aa6.68□□□□□ -1.34
CHKB-CPT1B-203ENST00000492556 LCE3EQ5T5B0 92 aa6.64□□□□□ -1.35
CHKB-CPT1B-203ENST00000492556 MT1MQ8N339 61 aa6.58□□□□□ -1.36
CHKB-CPT1B-203ENST00000492556 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
CHKB-CPT1B-203ENST00000492556 KRTAP9-6A8MVA2 160 aa6.53□□□□□ -1.36
CHKB-CPT1B-203ENST00000492556 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
CHKB-CPT1B-203ENST00000492556 KRTAP19-6Q3LI70 58 aa6.43□□□□□ -1.38
CHKB-CPT1B-203ENST00000492556 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
CHKB-CPT1B-203ENST00000492556 PRM1P04553 51 aa6.29□□□□□ -1.4
CHKB-CPT1B-203ENST00000492556 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
CHKB-CPT1B-203ENST00000492556 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.43
CHKB-CPT1B-203ENST00000492556 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
CHKB-CPT1B-203ENST00000492556 MT1AP04731 61 aa6.1□□□□□ -1.43
CHKB-CPT1B-203ENST00000492556 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
CHKB-CPT1B-203ENST00000492556 MT3P25713 68 aa6.06□□□□□ -1.44
CHKB-CPT1B-203ENST00000492556 MT4P47944 62 aa6.02□□□□□ -1.45
CHKB-CPT1B-203ENST00000492556 USH2AO75445 5202 aa5.89□□□□□ -1.47
CHKB-CPT1B-203ENST00000492556 KMT2DO14686 5537 aa5.88□□□□□ -1.47
CHKB-CPT1B-203ENST00000492556 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
CHKB-CPT1B-203ENST00000492556 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
CHKB-CPT1B-203ENST00000492556 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.47
CHKB-CPT1B-203ENST00000492556 LCE1BQ5T7P3 118 aa5.82□□□□□ -1.48
CHKB-CPT1B-203ENST00000492556 KRTAP9-6A0A140TA67 174 aa5.79□□□□□ -1.48
CHKB-CPT1B-203ENST00000492556 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
CHKB-CPT1B-203ENST00000492556 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
CHKB-CPT1B-203ENST00000492556 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
CHKB-CPT1B-203ENST00000492556 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
CHKB-CPT1B-203ENST00000492556 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
CHKB-CPT1B-203ENST00000492556 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
CHKB-CPT1B-203ENST00000492556 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
CHKB-CPT1B-203ENST00000492556 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
CHKB-CPT1B-203ENST00000492556 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
CHKB-CPT1B-203ENST00000492556 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
CHKB-CPT1B-203ENST00000492556 SSPOA2VEC9 5147 aa5.4□□□□□ -1.54
CHKB-CPT1B-203ENST00000492556 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
CHKB-CPT1B-203ENST00000492556 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
CHKB-CPT1B-203ENST00000492556 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
CHKB-CPT1B-203ENST00000492556 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
CHKB-CPT1B-203ENST00000492556 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
CHKB-CPT1B-203ENST00000492556 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
CHKB-CPT1B-203ENST00000492556 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
CHKB-CPT1B-203ENST00000492556 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
CHKB-CPT1B-203ENST00000492556 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
CHKB-CPT1B-203ENST00000492556 LCE1FQ5T754 118 aa5.01□□□□□ -1.61
CHKB-CPT1B-203ENST00000492556 MUC19Q7Z5P9 8384 aa4.99□□□□□ -1.61
CHKB-CPT1B-203ENST00000492556 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
CHKB-CPT1B-203ENST00000492556 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
CHKB-CPT1B-203ENST00000492556 NEBP20929 6669 aa4.66□□□□□ -1.66
CHKB-CPT1B-203ENST00000492556 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
CHKB-CPT1B-203ENST00000492556 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
CHKB-CPT1B-203ENST00000492556 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
CHKB-CPT1B-203ENST00000492556 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
CHKB-CPT1B-203ENST00000492556 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
CHKB-CPT1B-203ENST00000492556 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
CHKB-CPT1B-203ENST00000492556 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CHKB-CPT1B-203ENST00000492556 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
CHKB-CPT1B-203ENST00000492556 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
CHKB-CPT1B-203ENST00000492556 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
CHKB-CPT1B-203ENST00000492556 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
CHKB-CPT1B-203ENST00000492556 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CHKB-CPT1B-203ENST00000492556 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
CHKB-CPT1B-203ENST00000492556 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.82
CHKB-CPT1B-203ENST00000492556 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
CHKB-CPT1B-203ENST00000492556 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
CHKB-CPT1B-203ENST00000492556 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CHKB-CPT1B-203ENST00000492556 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
CHKB-CPT1B-203ENST00000492556 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
CHKB-CPT1B-203ENST00000492556 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
CHKB-CPT1B-203ENST00000492556 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
CHKB-CPT1B-203ENST00000492556 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
CHKB-CPT1B-203ENST00000492556 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CHKB-CPT1B-203ENST00000492556 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
CHKB-CPT1B-203ENST00000492556 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 10 ms