RNA–Protein interactions for RNA: ENST00000492259.6

RTEL1-TNFRSF6B-203, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 5

Gene RTEL1-TNFRSF6B, Length 4,824 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-203ENST00000492259 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
RTEL1-TNFRSF6B-203ENST00000492259 PRM1P04553 51 aa4.91□□□□□ -1.62
RTEL1-TNFRSF6B-203ENST00000492259 MT1EP04732 61 aa4.9□□□□□ -1.62
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.63
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-6Q3LI70 58 aa4.9□□□□□ -1.63
RTEL1-TNFRSF6B-203ENST00000492259 LCE2AQ5TA79 106 aaPredicted RBP4.88□□□□□ -1.63
RTEL1-TNFRSF6B-203ENST00000492259 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
RTEL1-TNFRSF6B-203ENST00000492259 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
RTEL1-TNFRSF6B-203ENST00000492259 HMCN2Q8NDA2 5059 aa4.75□□□□□ -1.65
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
RTEL1-TNFRSF6B-203ENST00000492259 MT1MQ8N339 61 aa4.69□□□□□ -1.66
RTEL1-TNFRSF6B-203ENST00000492259 MT3P25713 68 aa4.63□□□□□ -1.67
RTEL1-TNFRSF6B-203ENST00000492259 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-6A0A140TA67 174 aa4.59□□□□□ -1.67
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
RTEL1-TNFRSF6B-203ENST00000492259 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
RTEL1-TNFRSF6B-203ENST00000492259 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
RTEL1-TNFRSF6B-203ENST00000492259 USH2AO75445 5202 aa4.41□□□□□ -1.7
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 MT1AP04731 61 aa4.38□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 MT4P47944 62 aa4.35□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 KMT2DO14686 5537 aa4.35□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
RTEL1-TNFRSF6B-203ENST00000492259 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.74
RTEL1-TNFRSF6B-203ENST00000492259 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
RTEL1-TNFRSF6B-203ENST00000492259 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
RTEL1-TNFRSF6B-203ENST00000492259 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
RTEL1-TNFRSF6B-203ENST00000492259 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
RTEL1-TNFRSF6B-203ENST00000492259 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
RTEL1-TNFRSF6B-203ENST00000492259 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
RTEL1-TNFRSF6B-203ENST00000492259 LCE1EQ5T753 118 aa3.65□□□□□ -1.82
RTEL1-TNFRSF6B-203ENST00000492259 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
RTEL1-TNFRSF6B-203ENST00000492259 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
RTEL1-TNFRSF6B-203ENST00000492259 NEBP20929 6669 aa3.63□□□□□ -1.83
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
RTEL1-TNFRSF6B-203ENST00000492259 GPR98Q8WXG9 6306 aa3.41□□□□□ -1.86
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP9-9Q9BYP9 154 aa3.37□□□□□ -1.87
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
RTEL1-TNFRSF6B-203ENST00000492259 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
RTEL1-TNFRSF6B-203ENST00000492259 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
RTEL1-TNFRSF6B-203ENST00000492259 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-8O75690 187 aa2.58□□□□□ -2
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.04
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
RTEL1-TNFRSF6B-203ENST00000492259 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
RTEL1-TNFRSF6B-203ENST00000492259 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.05
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
RTEL1-TNFRSF6B-203ENST00000492259 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
RTEL1-TNFRSF6B-203ENST00000492259 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
RTEL1-TNFRSF6B-203ENST00000492259 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 69.8 ms