RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 LRP2P98164 4655 aa4.68□□□□□ -1.66
PKD1-220ENST00000487932 KRTAP9-6A0A140TA67 174 aa4.63□□□□□ -1.67
PKD1-220ENST00000487932 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
PKD1-220ENST00000487932 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.68
PKD1-220ENST00000487932 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
PKD1-220ENST00000487932 KMT2CQ8NEZ4 4911 aaKnown RBP4.55□□□□□ -1.68
PKD1-220ENST00000487932 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
PKD1-220ENST00000487932 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
PKD1-220ENST00000487932 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
PKD1-220ENST00000487932 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
PKD1-220ENST00000487932 EPPK1P58107 5090 aaKnown RBP4.44□□□□□ -1.7
PKD1-220ENST00000487932 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
PKD1-220ENST00000487932 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
PKD1-220ENST00000487932 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
PKD1-220ENST00000487932 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
PKD1-220ENST00000487932 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
PKD1-220ENST00000487932 LCE2AQ5TA79 106 aaPredicted RBP4.34□□□□□ -1.71
PKD1-220ENST00000487932 MT1AP04731 61 aa4.33□□□□□ -1.72
PKD1-220ENST00000487932 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
PKD1-220ENST00000487932 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
PKD1-220ENST00000487932 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
PKD1-220ENST00000487932 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
PKD1-220ENST00000487932 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
PKD1-220ENST00000487932 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
PKD1-220ENST00000487932 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
PKD1-220ENST00000487932 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
PKD1-220ENST00000487932 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.74
PKD1-220ENST00000487932 FSIP2Q5CZC0 6907 aa4.15□□□□□ -1.75
PKD1-220ENST00000487932 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
PKD1-220ENST00000487932 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
PKD1-220ENST00000487932 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
PKD1-220ENST00000487932 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
PKD1-220ENST00000487932 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
PKD1-220ENST00000487932 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
PKD1-220ENST00000487932 HMCN2Q8NDA2 5059 aa4.05□□□□□ -1.76
PKD1-220ENST00000487932 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
PKD1-220ENST00000487932 MUC2Q02817 5179 aa3.97□□□□□ -1.77
PKD1-220ENST00000487932 UBR4Q5T4S7 5183 aa3.96□□□□□ -1.78
PKD1-220ENST00000487932 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
PKD1-220ENST00000487932 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
PKD1-220ENST00000487932 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
PKD1-220ENST00000487932 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
PKD1-220ENST00000487932 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
PKD1-220ENST00000487932 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
PKD1-220ENST00000487932 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
PKD1-220ENST00000487932 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
PKD1-220ENST00000487932 DSTQ03001 7570 aaKnown RBP3.45□□□□□ -1.86
PKD1-220ENST00000487932 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
PKD1-220ENST00000487932 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
PKD1-220ENST00000487932 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
PKD1-220ENST00000487932 NEBP20929 6669 aa3.36□□□□□ -1.87
PKD1-220ENST00000487932 USH2AO75445 5202 aa3.34□□□□□ -1.87
PKD1-220ENST00000487932 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.87
PKD1-220ENST00000487932 KMT2DO14686 5537 aa3.32□□□□□ -1.88
PKD1-220ENST00000487932 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
PKD1-220ENST00000487932 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
PKD1-220ENST00000487932 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
PKD1-220ENST00000487932 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
PKD1-220ENST00000487932 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
PKD1-220ENST00000487932 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
PKD1-220ENST00000487932 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
PKD1-220ENST00000487932 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
PKD1-220ENST00000487932 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
PKD1-220ENST00000487932 MUC5ACP98088 5654 aa2.55□□□□□ -2
PKD1-220ENST00000487932 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
PKD1-220ENST00000487932 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
PKD1-220ENST00000487932 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
PKD1-220ENST00000487932 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
PKD1-220ENST00000487932 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
PKD1-220ENST00000487932 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
PKD1-220ENST00000487932 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
PKD1-220ENST00000487932 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
PKD1-220ENST00000487932 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
PKD1-220ENST00000487932 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
PKD1-220ENST00000487932 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
PKD1-220ENST00000487932 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
PKD1-220ENST00000487932 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.69□□□□□ -2.14
PKD1-220ENST00000487932 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 19.6 ms