RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 KRTAP9-2Q9BYQ4 174 aa4.39□□□□□ -1.71
TFAM-204ENST00000487519 MT1MQ8N339 61 aa4.39□□□□□ -1.71
TFAM-204ENST00000487519 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
TFAM-204ENST00000487519 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
TFAM-204ENST00000487519 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
TFAM-204ENST00000487519 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
TFAM-204ENST00000487519 MT3P25713 68 aa4.32□□□□□ -1.72
TFAM-204ENST00000487519 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
TFAM-204ENST00000487519 MUC2Q02817 5179 aa4.28□□□□□ -1.72
TFAM-204ENST00000487519 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
TFAM-204ENST00000487519 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
TFAM-204ENST00000487519 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
TFAM-204ENST00000487519 PRM1P04553 51 aa4.18□□□□□ -1.74
TFAM-204ENST00000487519 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
TFAM-204ENST00000487519 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
TFAM-204ENST00000487519 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
TFAM-204ENST00000487519 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
TFAM-204ENST00000487519 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
TFAM-204ENST00000487519 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
TFAM-204ENST00000487519 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
TFAM-204ENST00000487519 MT1AP04731 61 aa4.05□□□□□ -1.76
TFAM-204ENST00000487519 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
TFAM-204ENST00000487519 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
TFAM-204ENST00000487519 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
TFAM-204ENST00000487519 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
TFAM-204ENST00000487519 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
TFAM-204ENST00000487519 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
TFAM-204ENST00000487519 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.8
TFAM-204ENST00000487519 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.8
TFAM-204ENST00000487519 KRTAP6-3Q3LI67 103 aa3.83□□□□□ -1.8
TFAM-204ENST00000487519 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
TFAM-204ENST00000487519 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
TFAM-204ENST00000487519 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
TFAM-204ENST00000487519 USH2AO75445 5202 aa3.81□□□□□ -1.8
TFAM-204ENST00000487519 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
TFAM-204ENST00000487519 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
TFAM-204ENST00000487519 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
TFAM-204ENST00000487519 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
TFAM-204ENST00000487519 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
TFAM-204ENST00000487519 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
TFAM-204ENST00000487519 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
TFAM-204ENST00000487519 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
TFAM-204ENST00000487519 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
TFAM-204ENST00000487519 KMT2DO14686 5537 aa3.58□□□□□ -1.84
TFAM-204ENST00000487519 NEBP20929 6669 aa3.41□□□□□ -1.86
TFAM-204ENST00000487519 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
TFAM-204ENST00000487519 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
TFAM-204ENST00000487519 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
TFAM-204ENST00000487519 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
TFAM-204ENST00000487519 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
TFAM-204ENST00000487519 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.89
TFAM-204ENST00000487519 KRTAP4-6Q9BYQ5 205 aa3.23□□□□□ -1.89
TFAM-204ENST00000487519 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
TFAM-204ENST00000487519 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
TFAM-204ENST00000487519 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
TFAM-204ENST00000487519 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
TFAM-204ENST00000487519 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
TFAM-204ENST00000487519 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
TFAM-204ENST00000487519 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
TFAM-204ENST00000487519 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
TFAM-204ENST00000487519 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
TFAM-204ENST00000487519 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
TFAM-204ENST00000487519 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
TFAM-204ENST00000487519 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
TFAM-204ENST00000487519 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
TFAM-204ENST00000487519 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
TFAM-204ENST00000487519 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
TFAM-204ENST00000487519 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
TFAM-204ENST00000487519 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
TFAM-204ENST00000487519 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
TFAM-204ENST00000487519 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
TFAM-204ENST00000487519 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
TFAM-204ENST00000487519 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
TFAM-204ENST00000487519 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
TFAM-204ENST00000487519 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
TFAM-204ENST00000487519 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
TFAM-204ENST00000487519 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 138.7 ms