RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
PCDH17-202ENST00000484979 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
PCDH17-202ENST00000484979 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
PCDH17-202ENST00000484979 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
PCDH17-202ENST00000484979 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
PCDH17-202ENST00000484979 MUC2Q02817 5179 aa5.08□□□□□ -1.6
PCDH17-202ENST00000484979 MT1MQ8N339 61 aa5.07□□□□□ -1.6
PCDH17-202ENST00000484979 RNF213Q63HN8 5207 aa5.06□□□□□ -1.6
PCDH17-202ENST00000484979 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
PCDH17-202ENST00000484979 MT3P25713 68 aa5.03□□□□□ -1.6
PCDH17-202ENST00000484979 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
PCDH17-202ENST00000484979 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.61
PCDH17-202ENST00000484979 MT4P47944 62 aa4.94□□□□□ -1.62
PCDH17-202ENST00000484979 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
PCDH17-202ENST00000484979 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
PCDH17-202ENST00000484979 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
PCDH17-202ENST00000484979 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
PCDH17-202ENST00000484979 MT1AP04731 61 aa4.74□□□□□ -1.65
PCDH17-202ENST00000484979 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
PCDH17-202ENST00000484979 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
PCDH17-202ENST00000484979 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
PCDH17-202ENST00000484979 LCE1BQ5T7P3 118 aa4.71□□□□□ -1.66
PCDH17-202ENST00000484979 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
PCDH17-202ENST00000484979 KRTAP6-3Q3LI67 103 aa4.67□□□□□ -1.66
PCDH17-202ENST00000484979 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
PCDH17-202ENST00000484979 MACF1Q9UPN3 7388 aaKnown RBP4.62□□□□□ -1.67
PCDH17-202ENST00000484979 KRTAP2-3P0C7H8 128 aa4.58□□□□□ -1.68
PCDH17-202ENST00000484979 KRTAP2-4Q9BYR9 128 aa4.58□□□□□ -1.68
PCDH17-202ENST00000484979 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
PCDH17-202ENST00000484979 PRM1P04553 51 aa4.57□□□□□ -1.68
PCDH17-202ENST00000484979 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
PCDH17-202ENST00000484979 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
PCDH17-202ENST00000484979 KMT2DO14686 5537 aa4.47□□□□□ -1.69
PCDH17-202ENST00000484979 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
PCDH17-202ENST00000484979 USH2AO75445 5202 aa4.44□□□□□ -1.7
PCDH17-202ENST00000484979 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
PCDH17-202ENST00000484979 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
PCDH17-202ENST00000484979 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.7
PCDH17-202ENST00000484979 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
PCDH17-202ENST00000484979 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
PCDH17-202ENST00000484979 KRTAP6-2Q3LI66 62 aa4.33□□□□□ -1.72
PCDH17-202ENST00000484979 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
PCDH17-202ENST00000484979 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
PCDH17-202ENST00000484979 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
PCDH17-202ENST00000484979 MUC19Q7Z5P9 8384 aa4.13□□□□□ -1.75
PCDH17-202ENST00000484979 LCE1CQ5T751 118 aa4□□□□□ -1.77
PCDH17-202ENST00000484979 LCE1EQ5T753 118 aa4□□□□□ -1.77
PCDH17-202ENST00000484979 LCE1FQ5T754 118 aa4□□□□□ -1.77
PCDH17-202ENST00000484979 NEBP20929 6669 aa3.98□□□□□ -1.77
PCDH17-202ENST00000484979 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
PCDH17-202ENST00000484979 SSPOA2VEC9 5147 aa3.97□□□□□ -1.77
PCDH17-202ENST00000484979 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
PCDH17-202ENST00000484979 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
PCDH17-202ENST00000484979 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
PCDH17-202ENST00000484979 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
PCDH17-202ENST00000484979 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
PCDH17-202ENST00000484979 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
PCDH17-202ENST00000484979 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PCDH17-202ENST00000484979 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
PCDH17-202ENST00000484979 HMCN1Q96RW7 5635 aa3.27□□□□□ -1.89
PCDH17-202ENST00000484979 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
PCDH17-202ENST00000484979 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
PCDH17-202ENST00000484979 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
PCDH17-202ENST00000484979 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
PCDH17-202ENST00000484979 KRTAP5-3Q6L8H2 238 aa3.12□□□□□ -1.91
PCDH17-202ENST00000484979 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
PCDH17-202ENST00000484979 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
PCDH17-202ENST00000484979 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
PCDH17-202ENST00000484979 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
PCDH17-202ENST00000484979 KRTAP5-10Q6L8G5 202 aa2.58□□□□□ -2
PCDH17-202ENST00000484979 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
PCDH17-202ENST00000484979 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
PCDH17-202ENST00000484979 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
PCDH17-202ENST00000484979 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
PCDH17-202ENST00000484979 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
PCDH17-202ENST00000484979 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
PCDH17-202ENST00000484979 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
PCDH17-202ENST00000484979 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 190.8 ms