RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 KRTAP9-6A0A140TA67 174 aa3.07□□□□□ -1.92
CDK5RAP2-216ENST00000483412 KRTAP19-6Q3LI70 58 aa3.07□□□□□ -1.92
CDK5RAP2-216ENST00000483412 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
CDK5RAP2-216ENST00000483412 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
CDK5RAP2-216ENST00000483412 MT1LQ93083 61 aa3.04□□□□□ -1.92
CDK5RAP2-216ENST00000483412 PRM1P04553 51 aa3.04□□□□□ -1.92
CDK5RAP2-216ENST00000483412 MT1EP04732 61 aa3.03□□□□□ -1.92
CDK5RAP2-216ENST00000483412 UBR4Q5T4S7 5183 aa2.98□□□□□ -1.93
CDK5RAP2-216ENST00000483412 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
CDK5RAP2-216ENST00000483412 MT1MQ8N339 61 aa2.93□□□□□ -1.94
CDK5RAP2-216ENST00000483412 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
CDK5RAP2-216ENST00000483412 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
CDK5RAP2-216ENST00000483412 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
CDK5RAP2-216ENST00000483412 MUC2Q02817 5179 aa2.85□□□□□ -1.95
CDK5RAP2-216ENST00000483412 KRTAP19-7Q3SYF9 63 aa2.85□□□□□ -1.95
CDK5RAP2-216ENST00000483412 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.96
CDK5RAP2-216ENST00000483412 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.96
CDK5RAP2-216ENST00000483412 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.96
CDK5RAP2-216ENST00000483412 MT4P47944 62 aa2.81□□□□□ -1.96
CDK5RAP2-216ENST00000483412 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
CDK5RAP2-216ENST00000483412 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
CDK5RAP2-216ENST00000483412 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
CDK5RAP2-216ENST00000483412 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
CDK5RAP2-216ENST00000483412 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
CDK5RAP2-216ENST00000483412 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.73□□□□□ -1.97
CDK5RAP2-216ENST00000483412 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
CDK5RAP2-216ENST00000483412 MT1AP04731 61 aa2.7□□□□□ -1.98
CDK5RAP2-216ENST00000483412 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
CDK5RAP2-216ENST00000483412 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
CDK5RAP2-216ENST00000483412 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
CDK5RAP2-216ENST00000483412 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
CDK5RAP2-216ENST00000483412 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
CDK5RAP2-216ENST00000483412 USH2AO75445 5202 aa2.6□□□□□ -1.99
CDK5RAP2-216ENST00000483412 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
CDK5RAP2-216ENST00000483412 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
CDK5RAP2-216ENST00000483412 KRTAP5-9P26371 169 aa2.54□□□□□ -2
CDK5RAP2-216ENST00000483412 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
CDK5RAP2-216ENST00000483412 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
CDK5RAP2-216ENST00000483412 SSPOA2VEC9 5147 aa2.46□□□□□ -2.02
CDK5RAP2-216ENST00000483412 NEBP20929 6669 aa2.45□□□□□ -2.02
CDK5RAP2-216ENST00000483412 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CDK5RAP2-216ENST00000483412 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
CDK5RAP2-216ENST00000483412 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
CDK5RAP2-216ENST00000483412 OBSCNQ5VST9 7968 aa2.38□□□□□ -2.03
CDK5RAP2-216ENST00000483412 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CDK5RAP2-216ENST00000483412 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
CDK5RAP2-216ENST00000483412 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
CDK5RAP2-216ENST00000483412 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
CDK5RAP2-216ENST00000483412 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
CDK5RAP2-216ENST00000483412 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
CDK5RAP2-216ENST00000483412 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
CDK5RAP2-216ENST00000483412 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.05
CDK5RAP2-216ENST00000483412 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
CDK5RAP2-216ENST00000483412 KRTAP9-9Q9BYP9 154 aa2.11□□□□□ -2.07
CDK5RAP2-216ENST00000483412 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
CDK5RAP2-216ENST00000483412 MDN1Q9NU22 5596 aa2.1□□□□□ -2.07
CDK5RAP2-216ENST00000483412 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
CDK5RAP2-216ENST00000483412 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CDK5RAP2-216ENST00000483412 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
CDK5RAP2-216ENST00000483412 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
CDK5RAP2-216ENST00000483412 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
CDK5RAP2-216ENST00000483412 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
CDK5RAP2-216ENST00000483412 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
CDK5RAP2-216ENST00000483412 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
CDK5RAP2-216ENST00000483412 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
CDK5RAP2-216ENST00000483412 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
CDK5RAP2-216ENST00000483412 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
CDK5RAP2-216ENST00000483412 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
CDK5RAP2-216ENST00000483412 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
CDK5RAP2-216ENST00000483412 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
CDK5RAP2-216ENST00000483412 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
CDK5RAP2-216ENST00000483412 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
CDK5RAP2-216ENST00000483412 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
CDK5RAP2-216ENST00000483412 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
CDK5RAP2-216ENST00000483412 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
CDK5RAP2-216ENST00000483412 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
CDK5RAP2-216ENST00000483412 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
CDK5RAP2-216ENST00000483412 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 48 ms